| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0630 |
|---|
| Symbol | |
|---|
| ID | 8119673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 715451 |
|---|
| End bp | 716011 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644851019 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_003002991 |
|---|
| Protein GI | 251788270 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCG AACATGGCTG GCTGACCGAT GTCAGACGCG TTCCGTCACC GCATCAGGAT
GCGCGTCCGG AAGGTGAACG CCCTTCATTA CTGGTGATTC ACAACATCAG CTTACCCCCA
GGCGAATTTG GCGGTCCCTA TATTGATCAA CTCTTTACCG GTACGCTGGA TGGGGATGCT
CACCCCTATT TCGCGTCAAT ATGCCACCTG CGGGTATCTG CCCATTGTCT GATTCGTCGT
AACGGTGAAA TTGTACAGTA TGTGGCATTC GGACAACGGG CCTGGCATGC CGGGGTATCG
CAATTTGAAG GGCGAGAGCG TTGTAATGAT TTCGCGATTG GTATTGAACT GGAAGGCACC
GATACGCTGC CGTTTACCAC TCAACAGTAT GCCCGTCTGG CCGAGGTTAC GCAGTTGCTG
AGCGCGGCCT ATGGCATTAC GCCTGATCGC ATTACCGGGC ATAGCGATAT CGCACCGGGG
CGCAAGACCG ACCCCGGCCC TGCGTTCGAC TGGGATCGAT ATCAACGATT ATGGCAGGCA
CCACCGGAAC AAGGGGAGTA A
|
|---|
| Protein sequence | MKVEHGWLTD VRRVPSPHQD ARPEGERPSL LVIHNISLPP GEFGGPYIDQ LFTGTLDGDA
HPYFASICHL RVSAHCLIRR NGEIVQYVAF GQRAWHAGVS QFEGRERCND FAIGIELEGT
DTLPFTTQQY ARLAEVTQLL SAAYGITPDR ITGHSDIAPG RKTDPGPAFD WDRYQRLWQA
PPEQGE
|
|---|
| |