Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0629 |
Symbol | |
ID | 8119672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 714184 |
End bp | 715047 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644851018 |
Product | nucleoside-specific channel-forming protein Tsx |
Protein accession | YP_003002990 |
Protein GI | 251788269 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3248] Nucleoside-binding outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAA TCCTTACCGC CTGTGCCATC AGCACATTGT CATACAGCCT GCCCACCGTT GCGCAAGAGA GCGCGCCGCA ATATCTCTCC GACTGGTGGC ACCAGAGCAT CAATGTGGTA GGCAGCTATC ACACTCGTTT CGGGCCTCAG TTAAACAACG ATGTGTATCT GGAATATGAA GCGTTTGCCC GTAAGGACTG GTTTGACTTC TATGGCTACA TTGACGTACC GAAAAGCTTT GGTGCGGGCA ACACGCCTGA TCGTGGTATC TGGGACAAAG GCTCTCCATT ATTCATGGAG ATCGAACCTC GTTTCTCGAT TGATAAGTTG ACCAACACAC AGTTAGGTTT CGGCCCGTTC AAAGAGTGGT ACGTTGCCAA CAATATTATC TACGATCAGG GCCGCAATAA TGACTCACGT CAGAGCACCT GGTACGTAGG TCTGGGCACC GATATCGATA CCGGTACTGA CCTGTCGCTG TCCGCCAATA TCTATGCCAA GTACCAATGG CAGAACTACG GCGCGCCGAA TGAAGATCAG TGGGATGGTT ATCGTTTCAA AATCAAGTAT TTCTATCCGC TCACCTCAGT GTGGGGCGGT AAGCTGACCT ATATCGGCTT TACCAACTTC GACTTCGGTT CAGACCTGGC TAATGCAGCA GGCCCGTCTC GCACCAGCAA CGCCATTGCT TCCAGTCATA TCCTGGCGTT GAACTACGAT CACTGGCATT ACTCAGTGGT TGCCCGTTAC TTCCATAATG GCGGCCAGTG GGCAGACGGC ACCGAGCTGG ATTTTGGCCG CGGTCCGTTT AATGTTCGCT CTACAGGGTG GGGCTACTAT CTGGTCGCGG GCTACAACTT CTGA
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Protein sequence | MKKILTACAI STLSYSLPTV AQESAPQYLS DWWHQSINVV GSYHTRFGPQ LNNDVYLEYE AFARKDWFDF YGYIDVPKSF GAGNTPDRGI WDKGSPLFME IEPRFSIDKL TNTQLGFGPF KEWYVANNII YDQGRNNDSR QSTWYVGLGT DIDTGTDLSL SANIYAKYQW QNYGAPNEDQ WDGYRFKIKY FYPLTSVWGG KLTYIGFTNF DFGSDLANAA GPSRTSNAIA SSHILALNYD HWHYSVVARY FHNGGQWADG TELDFGRGPF NVRSTGWGYY LVAGYNF
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