| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0608 |
|---|
| Symbol | murD |
|---|
| ID | 8119891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 692787 |
|---|
| End bp | 694100 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644850997 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_003002969 |
|---|
| Protein GI | 251788248 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.634652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTATC AGGGTAGAAA GGTTGTCATT ATCGGGTTAG GGCTGACAGG GCTCTCCTGT
GTTGATTTTT TCCTTGCACG CGGGGTGGTG CCGCGCGTGG TGGATACCCG TATCAGTCCG
CCGGGCCTGG ATAAATTGCC TGAGTCCGTT GAACGTCATC TTGGCAGCCT GAATGAAGAG
TGGTTGCTGT CCGCCGATTT GATTATCGCA AGCCCAGGCA TCGCACTGGC GACACCGGTG
TTGTGCGACG CGGCCGCCGC CGGCATCGAA ATTATCGGCG ATATCGAACT GTTCTGCCGT
GAAGCGCAGG CGCCGATTGT CGCGATTACC GGCTCCAACG GCAAAAGCAC GGTGACTACA
CTGGTGGGCG AAATGGCGCG TGCCGCTGGA TGGGCCGTCG GCGTGGGCGG CAACATCGGC
GTGCCGGCGC TGGAATTGCT CAAGCAAGAA AGCCAGTTGT ATGTGCTGGA GTTATCGAGT
TTTCAACTGG AAACCACTTA CAGTCTACAT GCTGCGGCCG CCACGATTCT CAACGTTACC
GAGGATCATA CCAACCGCTA CCCGTTGGGG TTGCAGCAAT ATCGCGCCGC CAAGCTGCGT
ATTTATGAAA ACGCCAAGGT GTGCATTGTC AATGCGGACG ACGCCCTGAC GATGCCGGTG
CGCGGCGCTG ATGACCGCTG TCTGAGTTTC GGCGTGGATG TGGGCGATTA TCATCTGAAT
CGGCAGCAGG GAGAAACCTG GCTGCGGGTG AAAGGCGAAC GGGTACTGAA TACCCGCGAA
ATCAAACTGG TCGGTCAGCA TAACTACACC AATGCGCTGG CGGCGTTGGC GTTGGCGGAT
GCAGTGGGTA TTCCCCGGTC ATCGGCATTG ATTGCGCTGA CCACGTTTAC CGGTCTGCCG
CATCGTTTCC AACTGGCGCT GGAGCGTAAC GGTGTGCGCT GGGTTAATGA CTCCAAGGCG
ACCAACGTCG GCAGCACCGA AGCTGCGCTG AGCGGGTTGC ACGTCGATGG CATGTTGCAT
TTGCTGTTGG GTGGCGACGG AAAATCGGCG GATTTCTCCC CGCTGCTGCG TTATCTGCAA
GGCGACCGTA TCCGGCTGTA TTGCTTTGGC CGGGATGGTG GACAACTGGC GGCGTTGCGT
CCGGACATCG CTGAACGGAC CGACACCATG GAGCAGGCGA TGACGCTCAT CGCCGGTCGT
ATTCAGCCCG GCGATATGGT GTTGTTGTCG CCGGCTTGCG CCAGTCTTGA TCAGTTCCGC
AGCTTTGAAC AACGCGGCGA CGAGTTCGCT CGTCTGGCGG AGGAACTGGG ATAA
|
|---|
| Protein sequence | MDYQGRKVVI IGLGLTGLSC VDFFLARGVV PRVVDTRISP PGLDKLPESV ERHLGSLNEE
WLLSADLIIA SPGIALATPV LCDAAAAGIE IIGDIELFCR EAQAPIVAIT GSNGKSTVTT
LVGEMARAAG WAVGVGGNIG VPALELLKQE SQLYVLELSS FQLETTYSLH AAAATILNVT
EDHTNRYPLG LQQYRAAKLR IYENAKVCIV NADDALTMPV RGADDRCLSF GVDVGDYHLN
RQQGETWLRV KGERVLNTRE IKLVGQHNYT NALAALALAD AVGIPRSSAL IALTTFTGLP
HRFQLALERN GVRWVNDSKA TNVGSTEAAL SGLHVDGMLH LLLGGDGKSA DFSPLLRYLQ
GDRIRLYCFG RDGGQLAALR PDIAERTDTM EQAMTLIAGR IQPGDMVLLS PACASLDQFR
SFEQRGDEFA RLAEELG
|
|---|
| |