Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0529 |
Symbol | |
ID | 8120265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 601171 |
End bp | 602037 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644850918 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003002890 |
Protein GI | 251788169 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAAG CCAGTATCAT ACGTGACCTG CTCAACTGGC TGGAGGGTCA TCTGGACCAG CCTTTATCGC TGGATAATGT TGCAGCCAAG GCCGGCTATT CCAAATGGCA TTTGCAGAGA ATGTTCAAGG ACGTAACGGG TCATGCCATC GGCTCCTATA TTCGTGCCCG TCGGCTCACC AAAGCGGCTG TTGCGCTGTG TCTAACCAGC CGTCCTATTC TTGATATCGC CTTACAGTAC CGTTTTGACT CGCAACAGAC GTTTACCCGG GCGTTCAAAA AGCAATTTGC ACAGACACCA GCCTCCTACC GCCGCGCGGA TGACTGGAAT ACCTTTGGTA TCCACCCACC GATTCGGTTG GGGACGTTTA CCATGCCGCA ACCGCAATTC ATCACCATGC CAGAGACGCA GTTAGTTGGC CTGACGCAGA GCTATACCTG TAATCTGGAG GAAATTACCT GTTTTCGCAC TGAAATACGC ATTCATTTCT GGCGCCAGTA TTTGGGAGAA GTGAAACAGG TGCCGCCAGT ACTGTACGGG TTGCATCATT CTCGCCCAAG TACGGAGAAG GATGATGAAC ACGAAGTGCT GTATACCACC GCGCTGGAAC CTCATCATGT ACCGGAAGGC GTACACCCCG GCGAACCGGT AACATTTCCT GGCGGCGATT ACGCGTTGTT TATCTACGAA GGCCCGGCAG ACGATTTGCA GGATTTCATC ATCACGCTGT ACGACACCTG CCTGCCGACC TATAAACTGA CCCGGCGCAA AGGGTTCGAT GCCGAACGTT TTCATCCCAA AGGGGACGCC GACGCCGAAC CCCCTAAAAT CATACGCTGT GAATATCTGA TTCCCATCCA GCGTTAA
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Protein sequence | MDQASIIRDL LNWLEGHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGHAI GSYIRARRLT KAAVALCLTS RPILDIALQY RFDSQQTFTR AFKKQFAQTP ASYRRADDWN TFGIHPPIRL GTFTMPQPQF ITMPETQLVG LTQSYTCNLE EITCFRTEIR IHFWRQYLGE VKQVPPVLYG LHHSRPSTEK DDEHEVLYTT ALEPHHVPEG VHPGEPVTFP GGDYALFIYE GPADDLQDFI ITLYDTCLPT YKLTRRKGFD AERFHPKGDA DAEPPKIIRC EYLIPIQR
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