Gene Dd1591_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_0352 
Symbol 
ID8116914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand- 
Start bp390302 
End bp390727 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content44% 
IMG OID644850741 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_003002721 
Protein GI251788000 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.559193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGA TAAAAGAGTT TCGCGAATTC GCTATGCGCG GCAATGTTGT TGACCTGGCT 
GTAGGGGTCA TTATTGGTGC GGCATTTGGG AAAATCGTAT CGTCGCTAGT ATCGGACATT 
ATTATGCCGC CATTGGGGTT ACTGATAGGC GGTGTCGATT TCAAGCAGTT CCATTGGGTG 
TTACGAGAAG CACAGGGTAA CCTTGCTGCC GTCAGCATAA ACTACGGTAC ATTCATTCAG 
AATATTTTCG ATTTTGTTAT CGTGGCTTTT GCCATTTTTA TGGCCATTAA ACTCATGAAC 
AAATTACGCC GCACTCAACA GGAACAACCG AATACCCCGC CGAAAATCAC CGCAGAAGAA 
ACACTCCTGA CAGAAATAAG AGATCTACTC AAACAGCAGA TCGATAGCCA GTCTAAAAAT 
TCATAA
 
Protein sequence
MSLIKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSLVSDI IMPPLGLLIG GVDFKQFHWV 
LREAQGNLAA VSINYGTFIQ NIFDFVIVAF AIFMAIKLMN KLRRTQQEQP NTPPKITAEE 
TLLTEIRDLL KQQIDSQSKN S