Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0289 |
Symbol | |
ID | 8118611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 345326 |
End bp | 347071 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644850678 |
Product | PTS system ascorbate-specific transporter subunits IICB |
Protein accession | YP_003002658 |
Protein GI | 251787937 |
COG category | [S] Function unknown |
COG ID | [COG3037] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.227893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCC TCTACAGCAT TTTTTACATT TTCTACAGCC AGGTGATGAC TAAAGCCCCG TTATTGCTGG GGCTGGTAAC GTGCATCGGT TATCTGCTGC TCCGGCGTGA CGGTACGACG GTGATTAAAG GAACGGTCAA AACCATCGTC GGCTTTATGC TGGTGCAAGT CGGGTCGACC ACGCTGGTAT CTGGTTTCAA GCCGGTGATC GACAAAATCT CCGAGTATCA CCACCTGACC GGTTCGGTTA TCGACCCTTA CACCACCATG ATGGCGACCA TGGAAACCAT GGGGAGCCGT TATTCCTGGG TGGGGTATGC GGTGTTGCTG GCGCTCGGCC TGAATATCCT GCTGGTGGTA TTCCGGCGCA TCACCGGCAT TCGCACCATC ATGCTGACCG GCCACATCAT GTTTCAGCAG GTGGGGCTGG TGGCCGTGTT CTACGTGGTG ATGGGGGCTT CCATGTGGGA AACCATCCTC TATACCGCGG TGATCATGGC GCTCTATTGG GGGATCTCGT CCAACATCAT GTTCAAGCCG ACCCAGGCTG TGACCGGCGG GGCGGGGTTT TCTATCGGTC ACCAGCAGCA GGTGGCTTCC TGGGTAGCCA CCAGGCTGGC TCCCAAACTG GGAAACAAAG AAGACAGCGT TGATCAGCTC AAACTGCCGA AATGGCTGCA CATTTTCCAC GACAGCATTA CCGCTACCGC CATTGTGATG ACGGTTTTCT TCGGCATCAT TCTGTTGTCG TTCGGTCTTG ATAACCTGCA GAAAATGGCG GGTTCGACTC ACTGGACCAT TTATATTCTG GAAACCGGCC TTCGGTTTGC GGTGGCGATT CAGGTGATTG TGGCCGGGGT GCGTATGTTC GTGGCCGAGC TGTCCGAAGC GTTCAAGGGG ATCTCCGAGC GCGTCATCCC CAATGCCGTA TTGGCGATTG ATTGTGCCGC TATTTATGCC TATTCCCCCA ATGCGATGGT GTTTGGCTTC ATTTGGGGCA CGCTGGGCCA GTTCCTGGCG GTGATCGGCC TGCTGTTGTT TAACTCATCC ATCATGATTA TCCCCGGCTT TATTCCGATG TTCTTCTCTA ACGCCACCAT CGGGGTGTTT GCCAACCACT TCGGCGGCTG GCGGGCGGTA ATGAAGATCT GTTTCGTTAT GGGGATTATT GAAGTATTGG GTTCCGCCTG GGCGATTCAG TTGTTTGCCC ATAACGGCAC CCGTTTTAAC GGCTGGATGG GTATGGCGGA CTGGGCGTTG GTGTTCCCGG CCATTATGCA GGGGCTGTCG TTCTCATCCC TGTTCTTCTT TGTGTTGCTG GCCGGCGCCG GCGTTTATAT GTACTTCGCG TCACGCACCC TGCGTCAGGA AGAAGACAAC GCACAACCTG CCGCCGCCGT TGCTGATGCC GAGCCGGTCG AATCACAACC GGCCATGCCG GCCGATGGAC GCGCCGTGCG CATTCTGGCC GTGTGCGGCA ACGGACAGGG CTCTTCCATG ATGATGAAAA TGAAGATCGG CAAGTTTCTC GAACAACGGG GAGTGCCGCA CATCATGGAC TCCTGCGCCG TGGCGGATTA CAAATCCAAA CTCCCGACCA CCGACATCAT CGTCTCGTCC AAACATCTGG CCGGAGAAAT GCACCCCGGT GAAGGTAAGT TCGTATTGGG AGTACAAAAC ATGCTTAATC CGCAGTCGTT TGGCGACGAG TTGCTCGGGC TTATCAAGAA AAATTTCGCC GGTTAA
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Protein sequence | METLYSIFYI FYSQVMTKAP LLLGLVTCIG YLLLRRDGTT VIKGTVKTIV GFMLVQVGST TLVSGFKPVI DKISEYHHLT GSVIDPYTTM MATMETMGSR YSWVGYAVLL ALGLNILLVV FRRITGIRTI MLTGHIMFQQ VGLVAVFYVV MGASMWETIL YTAVIMALYW GISSNIMFKP TQAVTGGAGF SIGHQQQVAS WVATRLAPKL GNKEDSVDQL KLPKWLHIFH DSITATAIVM TVFFGIILLS FGLDNLQKMA GSTHWTIYIL ETGLRFAVAI QVIVAGVRMF VAELSEAFKG ISERVIPNAV LAIDCAAIYA YSPNAMVFGF IWGTLGQFLA VIGLLLFNSS IMIIPGFIPM FFSNATIGVF ANHFGGWRAV MKICFVMGII EVLGSAWAIQ LFAHNGTRFN GWMGMADWAL VFPAIMQGLS FSSLFFFVLL AGAGVYMYFA SRTLRQEEDN AQPAAAVADA EPVESQPAMP ADGRAVRILA VCGNGQGSSM MMKMKIGKFL EQRGVPHIMD SCAVADYKSK LPTTDIIVSS KHLAGEMHPG EGKFVLGVQN MLNPQSFGDE LLGLIKKNFA G
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