Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0197 |
Symbol | |
ID | 8117159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 237412 |
End bp | 238209 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644850589 |
Product | Cof-like hydrolase |
Protein accession | YP_003002569 |
Protein GI | 251787848 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00730737 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCCGA TTGTTGCTTC CGATCTGGAC GGCACACTGT TGTCGCCTGA TCACACCTTG TCACCCTATG CTAAAGAAAC CCTGCGTCTG ATGACGGAAC AGGGCGTTCA TTTTGTGTTT GCCACCGGTC GCCACCATAT GGATGTGGCA CAGATTCGCG ATAATCTGGC GATCAGCGCT TATATGATTA CCTCAAACGG CGCACGGGTG CATAACACCG ACGGCGAGCT GATTTTCAGC CACAATCTGG ACCGCGATAT CGCCCAAGAG CTGTATGGCA TGGTCTATCA CCATCCGGAA ATCATGACTC ATGTTTATCG CGACGATGAG TGGTTTCTGT GCCGCTCTCG TCCCGAGGAA GAGCGCTTTT TTACCGAGAC GGTGTTCCGC TACAAATTGT TCGACCCGGA AACGCTGGGT ACGGACGGCG TCGGCAAGGT GTTTTTCACC TGTGAGGATC ACGACAAACT GCTGCCGCTG GAAGAGGCGC TGAACGCGCG CTGGGGTGAT CGGGTGAACG TCAGTTTCTC CACCCTGAGC TGTCTGGAAG TGATGGCGGG CGGCGTATCT AAAGGCCACG CACTGGAACA GGTGGCGAAA ATCCTCGGTC ACACCATCAA AGATTGCATC GCCTTCGGCG ACGGCATGAA TGATTATGAA ATGCTGTCGA TGGCGGGCAA GGGCTGCATC ATGAGCAATG CCCACCAGCG ACTGAAAGAC ATGCTGCCGA ACAACGAGGT GATTGGCACC CACATCGAAC AAGCGGTGCC AAAATACCTG CGTCGTCTTT ATTTCTGA
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Protein sequence | MYPIVASDLD GTLLSPDHTL SPYAKETLRL MTEQGVHFVF ATGRHHMDVA QIRDNLAISA YMITSNGARV HNTDGELIFS HNLDRDIAQE LYGMVYHHPE IMTHVYRDDE WFLCRSRPEE ERFFTETVFR YKLFDPETLG TDGVGKVFFT CEDHDKLLPL EEALNARWGD RVNVSFSTLS CLEVMAGGVS KGHALEQVAK ILGHTIKDCI AFGDGMNDYE MLSMAGKGCI MSNAHQRLKD MLPNNEVIGT HIEQAVPKYL RRLYF
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