| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0138 |
|---|
| Symbol | |
|---|
| ID | 8117096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 165607 |
|---|
| End bp | 167253 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644850526 |
|---|
| Product | acetolactate synthase 2 catalytic subunit |
|---|
| Protein accession | YP_003002510 |
|---|
| Protein GI | 251787789 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGTG CACAGTGGGT GGTACAAGCG TTGCGGGCGC AGGGAGTGGA GACCGTATTC
GGTTATCCTG GTGGCGCAAT CATGCCGGTC TATGATGCGT TGTATGACGG TGGCGTGGAA
CACCTGCTCT GCCGTCATGA GCAGGGGGCT GCCATGGCCG CCATCGGTTA TGCTCGTTCT
ACCGGCAAGG TCGGGGTTTG TATCGCGACA TCCGGCCCCG GCGCGACCAA CCTGATTACC
GGTCTGGCGG ATGCCTTGCT GGATTCGGTT CCCATTGTGG CGATTACCGG GCAGGTTGGC
TCCGCGTTGA TCGGAACCGA TGCGTTCCAG GAAATCGATG TGCTCGGCCT GTCGCTGGCC
TGCACCAAAC ACAGTTTTCT GGTTGAGTCT ATCGACTCAT TACCGGAAAT CATGGCGGAA
GCGTTTGCCG TGGCGCGCAG TGGGCGTCCC GGCCCGGTAT TGATCGACAT TCCCAAGGAT
ATCCAACTGG CTGAGGGGGA TTTCTCTCCC TGTTTTATGC CGGTGGATGA TGCCATGCCT
TTTTCGATCC AGCAGGTCAC AGAAGCGCGG GCGATGCTGG CGCAGGCGAA AAAACCGGTG
CTGTACATCG GTGGCGGGGT AGGAATGGCG CAGGCGGTTC CGGCGCTGCG CACCTTTATC
GAGACGACCC GAATTCCCGC TGTGGCGACC CTGAAAGGGT TGGGTGCGGT GGAGAAAGAC
TACCCGTACT ATCTCGGCAT GATCGGTATG CACGGCACCC GTGCGGCTAA CCTGATGGTA
CAGGAATGCG ATTTATTGGT TGCCGTCGGC GCGCGTTTTG ATGACCGCGT GACCGGCAAG
CTGAGCGCGT TTGCGCCCCA TGCCAGTGTA ATCCACATGG ATATCGACCC GGCGGAACTG
AACAAACTGC GTCAGGCGCA CGTGGCGTTG CGTGGTGATC TGAATCAGTT GCTGCCGGCG
CTGCAACAGC CGCTGAATAT CGCCGACTGG CGTCAGCAGG CCGCGATGAT GAGAGCCGAA
TATGAATGGC GCTATGACCA CCCAGGCGAG GCTATTTACG CGCCGGCGCT GCTCCGTACC
TTGGCGGATC GTATGCCGGC TGAGACGGTG ATCACCACCG ATGTCGGCCA GCACCAAATG
TGGGCCGCTC AGCATATGCA CTTCACCCGC CCGGAAAATT TCATCACCTC AAGCGGGCTC
GGCACCATGG GGTTTGGCGT GCCGGCAGCG GTTGGCGCAC AGGTGGCGCG TCCTGACGAT
ACCGTAATCT GTATTTCCGG TGACGGCTCT TTCATGATGA ATGTGCAGGA GCTCGGCACC
ATCAAACGAA AACGTCTGCC GCTGAAGATA GTCTTGCTGG ACAATCAGCG GCTGGGTATG
GTTCGACAAT GGCAGCAACT GTTTTTCGAC GAACGCTACA GTGAAACCAA CCTCTCCGAT
AACCCCGATT TCCTGATGCT GGCCAGCGCC TTCGGCATTC CCGGCCGGCA AATCACCCGT
AAAGACCAGA TTGACTCCGC CCTGGATGCG CTGCTGAACA GCGAAGGCCC TTATCTGCTG
CATGTTTCCA TCGACGAGAA TGAGAATGTC TGGCCGCTGG TGCCACCCGG CGCCGGCAAT
GAAACCATGC TGGATAAGAC AGAATAG
|
|---|
| Protein sequence | MNGAQWVVQA LRAQGVETVF GYPGGAIMPV YDALYDGGVE HLLCRHEQGA AMAAIGYARS
TGKVGVCIAT SGPGATNLIT GLADALLDSV PIVAITGQVG SALIGTDAFQ EIDVLGLSLA
CTKHSFLVES IDSLPEIMAE AFAVARSGRP GPVLIDIPKD IQLAEGDFSP CFMPVDDAMP
FSIQQVTEAR AMLAQAKKPV LYIGGGVGMA QAVPALRTFI ETTRIPAVAT LKGLGAVEKD
YPYYLGMIGM HGTRAANLMV QECDLLVAVG ARFDDRVTGK LSAFAPHASV IHMDIDPAEL
NKLRQAHVAL RGDLNQLLPA LQQPLNIADW RQQAAMMRAE YEWRYDHPGE AIYAPALLRT
LADRMPAETV ITTDVGQHQM WAAQHMHFTR PENFITSSGL GTMGFGVPAA VGAQVARPDD
TVICISGDGS FMMNVQELGT IKRKRLPLKI VLLDNQRLGM VRQWQQLFFD ERYSETNLSD
NPDFLMLASA FGIPGRQITR KDQIDSALDA LLNSEGPYLL HVSIDENENV WPLVPPGAGN
ETMLDKTE
|
|---|
| |