| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_0082 |
|---|
| Symbol | |
|---|
| ID | 8117033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 100793 |
|---|
| End bp | 102193 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644850463 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_003002454 |
|---|
| Protein GI | 251787733 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.728671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATA AGCAACATAT CCTCATTGTT GATGATGACG CACATATTCT GGCCAGCTTG
CAGATGCTGT TGTCCATGGA AGGTTATCAG GTCACACTCT GCTCCGCTGT CGAGCAGGTG
CCTGTTCAGT TATCCCAACA TGATTTTGAT TTGATCTTGA TGGATATGAA CTATCAGCGC
GATACCACGT CCGGGCAGGA GGGATTGGTA TTGCTGGAAG AGATCAAACG GTATGACGAA
TACCTGCCTG TGGTGGCGAT GACAGGCTGG GGCAGCGTCG ATATTGCCGT CAGCGCGATG
CGGGCGGGAG CGGTGGATTT TATCCAGAAA CCCTGGGACA ACGAGCGGCT GCTGAATGTG
ATTCGTCAGC AGATCTCTTT TAGCCTCAGC CAGCGCTCCG GTAAACGCCT GAAAGAAGAA
AATAAGCTGC TGAAGCTGGA GCTGGAAGAC AATTTTAATG GCGAGTGGGT GGTGGAATCC
GCGCCGATGA AACAGCTGAT GCGGATGGTG GAGCAGGTCG CGGCGACGGA AACCAACATC
CTGATTTTGG GTGAAAACGG TACCGGCAAA AGCCTGTTGG CCCGGGTTAT CCATCAGCTT
TCTTCGCGCC GTGACGAGAA CATGGTGTCG GTGAACATGG GGTGCATCAA CGAGAACCTG
TTCGAAAGCG AAATGTTCGG TCATGTAAAA GGGGCGTTTA CCGATGCGCG GGAAAGCCGT
GTCGGGCGTT TCGAACTGGC GGATAAAGGT ACGCTGTTTC TGGATGAGGT CGGCAACCTG
CCGATGACCC AGCAAAGCAA GTTGTTGCGT ATTCTGGAGG AGCGGAGTTT TGAGCGGGTG
GGGTCGTCCC GTACCTTGAA AACCAACTGC CGCATTATTG CCGCCACCAA TGCCGATTTA
AGCGCCAGAG TGCGGGAAGG GACGTTTCGT CAGGATCTCT ATTACCGTCT CAATACTATT
GAGTTACACG TGCCGTCGCT GGCGGAGCGG CGGCAGGATA TTATGCCGTT GGCGCTGAAT
TTCATCGACC GGTACGCCAG AAAATACAAC AAGCCGGTGC CGGAGCTCAG CGCGTCCGGG
CAGGCGGCGT TATATGGCTA TCACTGGCCG GGTAATATCC GCGAATTGAG TCATTTGCTG
GAACGTGCGG TGCTGCTGTG TAGCTCATCA CGGCTGAACA GTGAGGATAT TTTCCCGTCA
CTGCCCGGCG CACCGCAAAA AATGGCGAGA GCCGAGCCGG AGCTGGCTTG TGATGCGACT
CTGGCCGATA TTGAAGAACG TCTGCTGTGT CAGCGTATGG CGAAATTTGA GGGGAATGCC
ATCAAGGCGG CCCGTTCGCT GGGGCTGAGC CGCAGTGCGT TTTACCGACG ACTGGAAAAA
TACAAGATTA ACCATGAGTA A
|
|---|
| Protein sequence | MADKQHILIV DDDAHILASL QMLLSMEGYQ VTLCSAVEQV PVQLSQHDFD LILMDMNYQR
DTTSGQEGLV LLEEIKRYDE YLPVVAMTGW GSVDIAVSAM RAGAVDFIQK PWDNERLLNV
IRQQISFSLS QRSGKRLKEE NKLLKLELED NFNGEWVVES APMKQLMRMV EQVAATETNI
LILGENGTGK SLLARVIHQL SSRRDENMVS VNMGCINENL FESEMFGHVK GAFTDARESR
VGRFELADKG TLFLDEVGNL PMTQQSKLLR ILEERSFERV GSSRTLKTNC RIIAATNADL
SARVREGTFR QDLYYRLNTI ELHVPSLAER RQDIMPLALN FIDRYARKYN KPVPELSASG
QAALYGYHWP GNIRELSHLL ERAVLLCSSS RLNSEDIFPS LPGAPQKMAR AEPELACDAT
LADIEERLLC QRMAKFEGNA IKAARSLGLS RSAFYRRLEK YKINHE
|
|---|
| |