Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3425 |
Symbol | |
ID | 8379126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3863786 |
End bp | 3867652 |
Gene Length | 3867 bp |
Protein Length | 1288 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645002662 |
Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
Protein accession | YP_003159913 |
Protein GI | 256831185 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAT ATTATCAGGA TTTTTTTATT TCAAATCAAG GGAGCGCTAA AATGAAAAGC TCGCGGGTAC CACTGCTTAT TTTTTTGTTT ATACTTTATT TTGCGAGCAT TGCTTTAGCA GCGCAATCAA TAACAGCAGA GCAATTTAGC TGCAACAATT ATGCACACAT ACCTCCTTTT TTATCAGACG CTGTTAAACC TTCAACAACA CTCATCGTCG ATTCATCAGG AAGCATGAAC GAGCATGCAT ATCAGGAAGA AGCGGTATAC TGGGGAAACG ACAACACAAG AGCATATACA GGATACAACG CTTCCAACGA ATATTACGGC TACTTTGAAC CCAGCGCAAA TTATACCTAC GATGAGACCG CTGATTATTT TAAACCCGAC ACTTCTGGCA AATGGAATGG CAATTTCATG AACTGGGTTT CTATGCACAG AACAGACATC GTCAGAAAAG TCCTCACGGG TGGAGCATAC AACAACGCCA CAAACACATA TTTAGTCTCT AAAACTGACG GCGGAAACAG CAGAGGCATG TACCACGTAT TCAACGCAAC AGGAAAAAAT GTAACTCCGT ATTCTGAACC TCTTGGATTT AAGCAAACCG CTAGCGATAA CTACATAACT CTCTACAAAG CTACACCACC CAATACAACA AGCAAAATAT GGTCAATAGG AAGCGAAGTA GGAAAATTCC AACTTAAAAT TTACTCTGAA AAAAAATACG GACTTCTCCA CCGTTTCGGC TACAGAATGA GGCTAGCTTT ATTTCGATAC GATGACGACG TCACTAAAAA AGACATATCT GGATATGAAG ATGGTGGCGA AATTCTGAAT TACATGACAT CGGACAGCAC AGAGATAGAC GACATAATCA ACAACATTGA CGAAATAGCC GTCAACAGCT GGACACCCCT AGCTGAAACG TTGTATACTG CATGTGGATA TATACGCCAA GACAACAATC TTTCCAATGA AATTGGGCCA CGATACGAAA CAGATGCATA CAATGTTCAG AGCGGGGATT CATACCCAAG CCCGTATTAC TTTGCTGATA TTGGGGATGA AATCTGGTGC TCCAATCAAA ATGTCATTCT CATTACCGAC GGCGAATCTA CCCAAGATCA AAACTTACCA GAATTCATCA AAGACGGCTT TGACGGTGCC AATAACGACA ACGTCACATA TCCAAACGAA GGCTCTGCCT TTCTCGACAA CGTCGCGTAC TGGGCACATA CGACGGACAT GCGTGACGAC CTTGAAGGAA ACCAGACTGT CGATCTCTAT ACAATCTTTG CCTTCGGATC CGGAAGCCAA CTCCTGAAAG AAGCCGCCAA ATGGGGAGGT TTCAAGGACA ACGATGGCAA TGGCGAACCA ACCAACTCAA CTGAATACGA CACCAGCCCA AAAGACGGAA TCCCTGACAA CTATTTCGAA GCTGCCACTG GCGCCGAACT TGAAAACGCG CTCATCACAG CATTCAGCAG CATACTGAAC CGCGTATCCT CCGGGTCGGC AGCATCGGTC GTCTCCACAT CCCGAAAAGG GGCTGGGCTT CTATACCAAG CGGTCTTCTG GCCTCAACGC GACAAGACAA CTTGGACCGG CGATGTTTAC GCTTATTGGC TGGATAATGA CGGAATCATG CATGAAGATA ACGGCACATC AGAGCATGTT CTCGACCCCG GAGACGCCAA GGTCACCATT TGGTATGATG AAAGCGACAA GGAATCCAAG GCTTGCTCAG GGGGCGAAGT GGTCAACGGG ACCTGCACTG GAGAAGAAAA GAAGTTGAGT TCTGTAAAGC ACGTTTGGAG CGCCTCCAGA TGGCTAAACA AGATGTCGGA TTCAGAAGCA TTAATACAGC GTTCAAATTA CAACTCTACA AGCGGCGAGG ACAAATCACT ACGCTACATT TTTACCTGGA ATGATGATGG AGATGGAATA ATAGACTACG ATAACGAAGT TGTCGATTTC ATCCCAGGCA ACGTAAATTC CACGCTATGT CCAGCTTCTG TAGTAAATTG GATCAGAGGC GAAGATAACA CAGCCTTGAG ATCCCGCGAA ATAAATGTCG ACAGAAATTT TGACGGCGAA CCTGAAACAC CTGAAACATG GCGCATGGGC GACATAATCA ATTCTTCACC GACTGTCGTC TCCGCACCGG CAGAAAATTA CGATTTATAC TGGAATGATT CAACATATAC AGAATTTTAT AAGCAGTACA AAAATAGACG CGTCATGGTC TATTTTGGCG CTAATGACGG GATGCTGCAC GCCGTTAACA GCGGGTTTTA CAGCGAAAAA ACAGGTGGAT ACTATACCAA CATAGAGAGT AACGGCACTC TTTCCACAAA TGGCGGTTTT GAGCTTGGCA CTGAAATGTG GGCGTATGTT CCGTACAATC TCTTGCCACA CCTGTCATGC CTGACAAACC CAAATTATCA GCACCAATAT TACGTGGATT TGAAACCTAG GGTGTTTGAC GCGAAAGTCT TTTACCCAGA CAAGGATCAC CCCGAGGGAT GGGGGACCAT CCTCGTATGC GGATTCAATT TCGGCGGCGA TGGTCAACAA AACCTTGCCG TGGGCACAAA CTACTTTGGC TCATCTTTTG TCATGTTTGA CGTGACAAAT CCGGAGGTTC CGCCGGTACT CTTGGGGGAA TTAACTTTCG ATGGCACATA CACCTTGGGC TACTCAGTGA ACCAACCGAC GCTTGTCGCA GTCAACGGAA CCGACGGGGA ACGATATTGG TACATGTTGT TTGGCACCGG CCCACTTGAA ACTGATGGAC AAAGCAATCA GAAGGCACAG GTCATTGTCA TTCCGATGGC GGCAATCATC GACGCAGAAA AAGGTCCTAA CATACCCACC TCGTTTTCGT TGCGCATGGA TGCAAGCATC GCCAAACCGT CAAGCAGCGA TAAAGGAATC CTTTCCCTTT CGGACTCGGA CAGCGCGATG GGAACAGGCT TTGTATCCGT TGATTACGAT TTCGATTTCT TCATTGACAT GATGTATTAC GGCACAGTGG TCACCCCTAA CAAGGGAGAC TTCACAGGCG GAGTACACAG GTTGAAAGTC GAAGCGGAAC CTGATCCCAG CAAATGGGAA CGCAAAGAGA TGACTGACAC CGGAGGGCCA ATGACCGGCG CTCCCAACGT CGGCTTCAAA GACAAGAATG TTTGGGTATA CTTCGGTACG GGCAAGTTCT GGGACACTTT GGATAAAACT GACCTAAGAA CCCAGTGGAT GTACGGCATC ATGGAGCCCA AAAAAACCGA CAGTTCCGCA TACAACTTTA GCACAATCCC CCCAGGAAAT TTGTTCGATG TTACGGGAAT TCAAGTTTTG AACGATGGCT CAGGACTTCT TGAATGCGAC GACAGCCTTG GAGACTGTCC ACCATCAGAC GTAACAACTG TAGAGGAACT GGCTGATTAT ATCCGAGATA CTCCAAACAT AGATGGATGG AGACGGGCGA TGAACAATAG CACCGGCGAA CGTGTTGTCG GGCAACCAAC ACTTTTTGGC GGCCTCACAA ATTTTACGAC GTTCACCCCA TCAAGCGACT ATTGCACAGC GGAGGGAACT AGCAAACTAT ATGCGCTCTA TTACCGAACC GGGACAGCGT GGAAAGAAAA CGTTTTCGGA GATGGAGGGG GAAAATACGT ACCGTTCATT GTCGACCTGG GGCAAGGCAT GGGTGTTTCT CCCAGCCTGC ACCTTGGCAG CGAGGAAGGC GTAAGAGCCT TCGTGCAGAC AAGCACCGGG AGCATCATCG AAATCCATCA GCCAAACCTG CCGATACCTA ACGTCAAGTC CGGCCGCGGC GGATGGCATA CCCTTGAAGT GGATTAA
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Protein sequence | MKKYYQDFFI SNQGSAKMKS SRVPLLIFLF ILYFASIALA AQSITAEQFS CNNYAHIPPF LSDAVKPSTT LIVDSSGSMN EHAYQEEAVY WGNDNTRAYT GYNASNEYYG YFEPSANYTY DETADYFKPD TSGKWNGNFM NWVSMHRTDI VRKVLTGGAY NNATNTYLVS KTDGGNSRGM YHVFNATGKN VTPYSEPLGF KQTASDNYIT LYKATPPNTT SKIWSIGSEV GKFQLKIYSE KKYGLLHRFG YRMRLALFRY DDDVTKKDIS GYEDGGEILN YMTSDSTEID DIINNIDEIA VNSWTPLAET LYTACGYIRQ DNNLSNEIGP RYETDAYNVQ SGDSYPSPYY FADIGDEIWC SNQNVILITD GESTQDQNLP EFIKDGFDGA NNDNVTYPNE GSAFLDNVAY WAHTTDMRDD LEGNQTVDLY TIFAFGSGSQ LLKEAAKWGG FKDNDGNGEP TNSTEYDTSP KDGIPDNYFE AATGAELENA LITAFSSILN RVSSGSAASV VSTSRKGAGL LYQAVFWPQR DKTTWTGDVY AYWLDNDGIM HEDNGTSEHV LDPGDAKVTI WYDESDKESK ACSGGEVVNG TCTGEEKKLS SVKHVWSASR WLNKMSDSEA LIQRSNYNST SGEDKSLRYI FTWNDDGDGI IDYDNEVVDF IPGNVNSTLC PASVVNWIRG EDNTALRSRE INVDRNFDGE PETPETWRMG DIINSSPTVV SAPAENYDLY WNDSTYTEFY KQYKNRRVMV YFGANDGMLH AVNSGFYSEK TGGYYTNIES NGTLSTNGGF ELGTEMWAYV PYNLLPHLSC LTNPNYQHQY YVDLKPRVFD AKVFYPDKDH PEGWGTILVC GFNFGGDGQQ NLAVGTNYFG SSFVMFDVTN PEVPPVLLGE LTFDGTYTLG YSVNQPTLVA VNGTDGERYW YMLFGTGPLE TDGQSNQKAQ VIVIPMAAII DAEKGPNIPT SFSLRMDASI AKPSSSDKGI LSLSDSDSAM GTGFVSVDYD FDFFIDMMYY GTVVTPNKGD FTGGVHRLKV EAEPDPSKWE RKEMTDTGGP MTGAPNVGFK DKNVWVYFGT GKFWDTLDKT DLRTQWMYGI MEPKKTDSSA YNFSTIPPGN LFDVTGIQVL NDGSGLLECD DSLGDCPPSD VTTVEELADY IRDTPNIDGW RRAMNNSTGE RVVGQPTLFG GLTNFTTFTP SSDYCTAEGT SKLYALYYRT GTAWKENVFG DGGGKYVPFI VDLGQGMGVS PSLHLGSEEG VRAFVQTSTG SIIEIHQPNL PIPNVKSGRG GWHTLEVD
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