Gene Dbac_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3357 
Symbol 
ID8379053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp3791158 
End bp3792174 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content62% 
IMG OID645002590 
Productrod shape-determining protein MreC 
Protein accessionYP_003159845 
Protein GI256831117 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.368226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCTC GCTTCAAACG CCTGGTCCTC TTTTTTTTTC TTCCGCTGTT CCTCTATTTT 
TCCATGTACA CATGGAACTG GAAGACGGGG TATCTCGATC GCCTGGCCGC CTTGACCGGG 
ATGGAGCTGA CCGGGTGGGT CCTGGCCCCG GGCAGATGGC TGCAGAACAA TGTCGACGAA 
TTCTGGTCGC GCTACGTCTA TCTGGTCGGC GTGCGCCAGG AGAACGAGGA CCTGGTCTTG 
CGGGTGCGGG AGCTTGAGCA GGAGCTGGGC CGCATATCCG AAAAGGCAAA ATCCGCCGAT 
CGCCTGACGT CCCTCTTGCG CTTCAGCCCC GAACCCCCCT GGGAGATGCG CGGGGGGCGG 
GTCATCGGCC AGAAGCTCGG TCCCAACGCG ATTCTGGAAA CCATACTTGT CGATGTGGGC 
CTGAGCCACG GCGTAAGGCT CAATGATCCG GTCATCTCGC CCAAGGGCGT GGTCGGAAGA 
ATCGCCAAGC CGGGTCTTCA TTTTTCTTCC GTGGTGCTCT TGTCGGATCC CTCCAGCCGA 
ATTCCCGTCA TGACCAGCGA GGGCCGCGTG CCGGCCATCG TTCAGGGCCA AGGCGCCGGA 
GCTTTCCTTG AGGTCAAGTT CATTCCCCGC AACGATCCGG TCAGCCCTGG CGAGATATTG 
CTCAGCTCCG GCCTGGGCGG CGTTTTTCCC AAGGGCATAC CCGTGGCCAG AGTGGTGGAA 
GTGACTCCGG CGGACGTTTC CCTTTTTCAG CGGGTTTATG CCGAACCCCT TCTCGCCCTG 
CGTTATTACG AGGAACTCCT GGTCCTGAGC CGTACGGACG GGTTCGACGC CGGTCAGCCC 
GTCATGTCTC CGGCCGTGAC CAACGCGTCC TCTCCCGAGG CTCCCAAGGC TCCCGATAAA 
ACTCCTGCAG CTCAGCCAGC GGCCGAGACC GCGCCTGCGG CGGGTCCGTC GGCAGCACCT 
CCTTCCGCGC CAGAGCCAGC CACTGTAACA CGGCACCCTG TGCGCAAGAA GCCGTGA
 
Protein sequence
MSPRFKRLVL FFFLPLFLYF SMYTWNWKTG YLDRLAALTG MELTGWVLAP GRWLQNNVDE 
FWSRYVYLVG VRQENEDLVL RVRELEQELG RISEKAKSAD RLTSLLRFSP EPPWEMRGGR 
VIGQKLGPNA ILETILVDVG LSHGVRLNDP VISPKGVVGR IAKPGLHFSS VVLLSDPSSR 
IPVMTSEGRV PAIVQGQGAG AFLEVKFIPR NDPVSPGEIL LSSGLGGVFP KGIPVARVVE 
VTPADVSLFQ RVYAEPLLAL RYYEELLVLS RTDGFDAGQP VMSPAVTNAS SPEAPKAPDK 
TPAAQPAAET APAAGPSAAP PSAPEPATVT RHPVRKKP