Gene Dbac_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3324 
Symbol 
ID8379020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3758739 
End bp3759965 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content56% 
IMG OID645002557 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003159812 
Protein GI256831084 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.397309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGA CCACGCTCAG CGACATCGTC GGGCCTGAAT ATACCAAGCT CGGATTTTTC 
CGCGAAGTGC AGGAAAAAAT GGGCGAGCTG GAGACCTACA ACGCGGAGCT TGAAAGAAAA
AAGCAGGAAA TCCAGGACAT CCTGAACGGA ATCATGGATC TTTTGGCAGT GGTTTCGCCG
GATTACCGCA TTGTCTACGT CAACAAAGTC TTCCACGACT ATTTCGACAT CCCGCATCCG
GAAGGCCTCT TCTGTTATCA GGTCTTTCGG GGAGGCTCCG AGCCCTGCAA AGTCTGCCCC
TTGCGCACGG CCCTGCAAAC CGGGAAGCCC GACCGGGCAT CATATATAGA CCACAGGCCG
GACCGCAGCC TGCACTTCGA AGTCGTGGCC TCGCCCATGT TCGACGACAA GAGCCATGTA
CGCACGGTCC TTGTCTCAAA GCGCGACGTG ACCATGGAAA AAGAGTATCA GGCCAAGTAT
TACCAGGCCG AAAAAATGGC CACCATCGGC CTCTTGGCCG CAGGCGTGGC CCATGAGATC
AACAACCCCC TGGCGGCCAT CAGCGGCTTT TCCGAAGCCC TGAAGCGCCG TCTGCCCTAC
CTCGGGACCC TGCTGGACAA GGACACGGAA CAGGGAATCC TGGAAGATTT CACGGACTAT
ACGACCACCA TCCTCGAAGA ATGCAACCGG TGCCGGGACA TTGTCGGGAA TCTGCTCTCG
TTCAGCAGTC AAAAAACATG CAAATTCAAT ACGATAGACT TAAATTCTCT GGTCGCTGGG
TCTTTGAAGA TCCTGCACCA CCAGATCAAA TTGCACCCAG GCATCACCCT GCATCAGGAT
CTGTGCCCGG AACCGGTGAC CATCCGTGGC GCTCAGGGAG AACTCAAGCA GGTCCTCCTG
AACCTCGTCC TCAACGCCAT GGACGCCATT GAGTCAAAAG GAAGCATCAC CATCCGCACC
AGCATGGACA GACCCGACCG CGCGGCGCTG ATCGTCGAGG ACACAGGCCA GGGCATCCCC
CCGGAAACCC TGGACAAGCT CTTCATCCCG TTCTTCACCA CCAAGACCAA AGGGCACAGC
ATCGGCATCG GCCTGTCCAT CTGCTACAAC ATCATCAAAA TGCACGGCGG GGAAATCCAC
GTCTGCAGCG AACCCGGCAA GGGTTCCGCC TTTCGGGTCA TGCTCCCGAC AGGATTTTCA
GCCAACAACA AGGATCTGGA TACATGA
 
Protein sequence
MGKTTLSDIV GPEYTKLGFF REVQEKMGEL ETYNAELERK KQEIQDILNG IMDLLAVVSP 
DYRIVYVNKV FHDYFDIPHP EGLFCYQVFR GGSEPCKVCP LRTALQTGKP DRASYIDHRP
DRSLHFEVVA SPMFDDKSHV RTVLVSKRDV TMEKEYQAKY YQAEKMATIG LLAAGVAHEI
NNPLAAISGF SEALKRRLPY LGTLLDKDTE QGILEDFTDY TTTILEECNR CRDIVGNLLS
FSSQKTCKFN TIDLNSLVAG SLKILHHQIK LHPGITLHQD LCPEPVTIRG AQGELKQVLL
NLVLNAMDAI ESKGSITIRT SMDRPDRAAL IVEDTGQGIP PETLDKLFIP FFTTKTKGHS
IGIGLSICYN IIKMHGGEIH VCSEPGKGSA FRVMLPTGFS ANNKDLDT