Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3130 |
Symbol | |
ID | 8378825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 3545681 |
End bp | 3546922 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645002365 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_003159621 |
Protein GI | 256830893 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGAGA CGTATCCGGA ACAGCTTTAC GACAAGTTTT TTGTCGCCCG TCAGCCCATA TTCACGGCAC AGATGCAGAT ATGGGGCTAT GAGCTGCTTT TCCGTCACGG AGAAAACATT CAGGAGGCGG TGTTCACGGA CGGGGACCAG GCCACGACGC AGATCATAGC CGACGGCTAC AATCTTGCGG TGCAGGGGCT GCGCAAGGGA GCCAAGGCTC TGGTCAATTT TCCGCGCACC CTCCTCGTCG GCCGGGCGCC CTATGTCCTG CCTGCCGACC AGTGCGTGGT GGAGATCCTG GAGACCGTAA GGCCAGAGCC CGAAGTCATC AGCGCCTGCC GGGAGCTCAA GAAGAGGGGA TACACCCTTG CTCTGGATGA TTTTGAAGGC GGACCGGGCC TTGAACCCTT GTGCGAGATG GTCGACATCA TCAAGATCGA CATCCTGGGC AAGACTCCGG CCGAGGTTGT GGCCATTATG GAGGGTGTCA AAAAGTACGA TGCGACGCTG CTGGCCGAGA AAGTGGAGAC CCTCGACGTT TTCAGGGTTT GCAAGCAGCT CGGCTTTACG TATTTTCAAG GTTTTTTCTT CAATCGCCCC GAGGTGATCC CCGGGCGAAA ACTTTCTGCC ACGCAAGTCA ACAAGGTCAA GCTGTTAAAG GAATTGAGCG TCCCGGACGT GGATTCCTCC CGTTTGGTGG AAATCATCCA GACGGATCTG GCCATTTCCT ACCGGTTGCT CAAATACATA AATTCCGCAT TTTTCGGTCT GCAGATCAAG ATCACGTCCA TTCCGCGCGC AGTTTCCATG CTCGGATGCC GTAACCTGCG GCAATGGCTG CAGGTGGTCA TCCTGTCCGA TGTGAGCACA CAGGACAAGG CGCACGAACT GGTCCGCATT TCCGTGCAAC GTGCCCGTTT TCTGCACCTT TTGGCCCACA GGCACCCCAC GCCCTTTGAC CAGGACAGCA TGTTCCTGCT GGGCTTTTTC TCCCTGCTCG ACGCCATTCT GGACCAGTCC ATGGGGCTGG TGCTGGAGGA GATTCCTTTG GAGCCGGGCA TCAAGCGGGC CCTGATTGAT CCGGATGATC CGAGTGCGGT CTGGCTCGAC TTGCTTGACG AGATAGATCG CTGCAACTGG GACCGTCTGA GCAGGAAGGC TGCGCAGCTG GGGGTTCCCA TCGATCTCGT CAACAGGCTC TCCGCCGAGG CCTCGATCTG GGCGGTCTGG GTCATGAGTT GA
|
Protein sequence | MEETYPEQLY DKFFVARQPI FTAQMQIWGY ELLFRHGENI QEAVFTDGDQ ATTQIIADGY NLAVQGLRKG AKALVNFPRT LLVGRAPYVL PADQCVVEIL ETVRPEPEVI SACRELKKRG YTLALDDFEG GPGLEPLCEM VDIIKIDILG KTPAEVVAIM EGVKKYDATL LAEKVETLDV FRVCKQLGFT YFQGFFFNRP EVIPGRKLSA TQVNKVKLLK ELSVPDVDSS RLVEIIQTDL AISYRLLKYI NSAFFGLQIK ITSIPRAVSM LGCRNLRQWL QVVILSDVST QDKAHELVRI SVQRARFLHL LAHRHPTPFD QDSMFLLGFF SLLDAILDQS MGLVLEEIPL EPGIKRALID PDDPSAVWLD LLDEIDRCNW DRLSRKAAQL GVPIDLVNRL SAEASIWAVW VMS
|
| |