Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_3112 |
Symbol | |
ID | 8378807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3522060 |
End bp | 3523730 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645002347 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_003159603 |
Protein GI | 256830875 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.735973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGTA GCGATAAAAT GATCAAAGGT TTGGAAAAGG CCCCGCACCG CTCCCTGCTT TTCGCTCTGG GCATGACCCG GGAAGAAATG AAGCGTCCGC TTATCGGCGT GGTCAATTCG GCCAACGAGA TCGTGCCGGG ACACATGCAT CTTGATATCA TAGCGAGGGC CGTCAAGGAC GGAGTGCGCA TGGCCGGAGG CACGCCCATG GAGTTTCCGA CCATCGGCGT CTGCGACGGG CTGGCCATGA ACCATGAAGG CATGAAGATG AGCCTGCCCA GCCGCGAACT CATCGCCGAC TCCATTGAAA TTTCGGCCAC GGCCGTGCCT TTTGACGGGC TGGTTTTCAT CCCCAACTGC GACAAGATCG TGCCTGGCAT GCTCATGGCC ATGTTGCGCC TCAACATCCC CTCCATCATG ATCAGCGGCG GGCCCATGCT GCCGGGCAAA TTCGAAGGCA AGACAATCGA TCTGATCACG GTCTTCGAGG GTGTGGGCAA GGTCAAGATC GGGAGCATGA CCGAAGCGGA GCTTGAGCGC ATGGAAGAAT GCGCCTGTCC CGGCTGCGGG TCCTGCGCCG GCATGTTCAC GGCCAACTCC ATGAACTGTC TGTCCGAGGC GTTGGGGCTG TCCCTGCCCG GCAACGGCAC CATTCCCGCT CCGACCAGCG CGCGCATCCG TCTGGCCAAG GACGCGGGCA TGCAGGTCAT GAGCCTGGTC GAAAAGAACA TTCGCCCACG CGACATCGTG ACCGAAAAAA GCGTGGCCAA CGGCGTGACC GTGGACATGG CGCTGGGCTG TTCCACCAAC ACGGTTTTGC ACCTGCCCGC GATTTTCCGC GAGGCCGAGC TTGATCTGAC CCTGGACATT TTCGACGAGA TCAGCCGCAA GACGCCCAAC CTCTGTCGCC TCTCCCCCGC CGGACCGCAT CACATAGCGG ACCTGCACGA GGCGGGCGGC ATCCCGGCCG TCATGAACGA GCTGGCCGCG AGCGGGCGCA TCGACCTTGA GGTCATGACC GTGACCGGCC GCACCCTGGG ACAGAACCTT GAGGCTCTGC AGCCCCGCAT CCTGCGCCCC GAGGTCATCC GCACCGTGGC CGAGCCGTAT TCCAAGGAAG GCGGCATCGC CATCTTGAAG GGCAATCTGG CCCTGGACGG CGCGGTGGTG AAACAATCCG CCGTGGCGCC CGAGATGATG CAGCGCACGG GCACGGCCAG GGTCTTCGAG AGCGAGGAAG AGGCCGTGAC CGCGATCATG GGCAAAAAGA TCAAAGCCGG CGACGTCGTC GTCATCCGTA ACGAAGGCCC GGTGGGCGGC CCCGGCATGC GCGAGATGCT GACCCCGACC TCGGCCATCT CCGGCCTTGG CCTGGGCGGC GAAGTGGCGC TGCTGACGGA CGGCCGTTTC AGCGGCGGCA CGCGCGGGGC GGCCATCGGG CATATCAGCC CGGAGGCGGC CGAAGGCGGA ATCATCGGGC TGGTGCAGGA AGGGGATCTG ATCAAGATCG ACATCCCGGG CCGCAGCCTG GAACTTCTTG TCGACGAGGC GGAACTGGAA AAACGCCGCC GCAACTGGAA GCCCTATCCC AAGGAAATCC GTTCTTCCAT CCTGCGTCGC TACAGCCGCA TGGCTTCGTC CGCGGCCAAG GGCGCGGTGA CTAAAATCTG A
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Protein sequence | MNRSDKMIKG LEKAPHRSLL FALGMTREEM KRPLIGVVNS ANEIVPGHMH LDIIARAVKD GVRMAGGTPM EFPTIGVCDG LAMNHEGMKM SLPSRELIAD SIEISATAVP FDGLVFIPNC DKIVPGMLMA MLRLNIPSIM ISGGPMLPGK FEGKTIDLIT VFEGVGKVKI GSMTEAELER MEECACPGCG SCAGMFTANS MNCLSEALGL SLPGNGTIPA PTSARIRLAK DAGMQVMSLV EKNIRPRDIV TEKSVANGVT VDMALGCSTN TVLHLPAIFR EAELDLTLDI FDEISRKTPN LCRLSPAGPH HIADLHEAGG IPAVMNELAA SGRIDLEVMT VTGRTLGQNL EALQPRILRP EVIRTVAEPY SKEGGIAILK GNLALDGAVV KQSAVAPEMM QRTGTARVFE SEEEAVTAIM GKKIKAGDVV VIRNEGPVGG PGMREMLTPT SAISGLGLGG EVALLTDGRF SGGTRGAAIG HISPEAAEGG IIGLVQEGDL IKIDIPGRSL ELLVDEAELE KRRRNWKPYP KEIRSSILRR YSRMASSAAK GAVTKI
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