Gene Dbac_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3094 
Symbol 
ID8378789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3500782 
End bp3503328 
Gene Length2547 bp 
Protein Length848 aa 
Translation table11 
GC content60% 
IMG OID645002329 
ProductDNA gyrase, A subunit 
Protein accessionYP_003159585 
Protein GI256830857 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.654737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCAACA TCAGTATCGA AAAAGAACTT CAGAAATCCT ATCTGGAATA TTCGCTGAGC 
GTCATCATCG GCCGGGCCAT CCCGGACGTG CGCGATGGCC TCAAGCCCGT TCATCGGCGT
ATTCTTTTCG CCATGCACGA GCTCGGCAAC ACGTACAACC GGGCTTACAA GAAGTCCGCC
CGCGTGGTCG GTGACGTCAT CGGTAAGTTT CACCCCCATG GCGACTCGGC CGTGTACGAC
GCCTTGGTGC GCATGGCTCA GGAATTCAAC ATGCGTGATC CCCTGGTCGA CGGCCAGGGC
AACTTCGGTT CCATCGACGG CGACTCCGCG GCGGCCATGC GTTACACCGA AGTGCGCATG
TCAAAGCTGG CCGGCTCCTT TTTGGCCGAC ATCGAAAAGG ACACGGTGGA ATTTCGTCCC
AACTACGACA ACTCCCTGCA GGAGCCTTCG GTGCTGCCGA CCAAGGTTCC GAACCTGCTG
GTCAACGGAT CCTCGGGCAT CGCCGTGGGC ATGGCCACCA ATATTCCGCC GCACAACCTG
GGCGAGGTGG TCGACGGGAC GCTGCGGCTG CTTGACGATC CCCAGATGTC CATCGACGAG
TTGATGCAGT ACATAAAAGC CCCGGATTTC CCCACCGGCG CGCTCATCTA CGGCAAGGCC
GGCATCCGCG AGGCCTACCG CACCGGTCGC GGTTCGGTGC GCATCCGTTC GCGCATCGAG
ATCGAAAAGC GCAAGGGGGA CCTGGAATCC ATTGTCGTCA AAGAGATTCC CTACGCCCTG
AACAAGTCCA CCCTGGTGGA AAAGATCGCC ATGCTGGTCA ACGAGCGCAA GATCGAGGGC
ATCTCCGACC TGCGCGACGA ATCGGACATG AAGGGCATCC GCATCGTCAT GGACCTCAAG
AAGGGCGTCT TCTCCGATGT GATCGTCAAT CAGCTCTTCA AATTCACGTC GCTCGAAACC
AGCTTCGGCA TCAACATGAT GGCGGTCGTC AACAACCGGC CCCAGCTGCT GAATGTGAAG
CAGGTGCTGG AATATTTTCT GGACTATCGC CGCGAGGTGG TCATCCGCCG TTCCCGCTTC
GACCTCAGGA AGGCCCAGCA TCGGGCGCAC ATCCTTGAAG GCCTGCGTAT CGCCCTTGAT
TTCATCGATG AAGTGGTCGC GCTTATCCGC GCCTCCAAGA CCCCGCAGGA GGCCAAGGAG
CGTCTGCGTG AACGCTTCGG CCTGTCCGAG ATCCAGGCCC AGGCCATTCT CGACATGCGC
TTGCAGCGGC TGACCAATCT GGAGCGCGAA AAGCTCCTGG AGGAATATGC CGAACTCCTG
AAGCAGATCG AATATCTGAC CAGCGTCATC GAGAACACGG AAGTCTTGAA ATCCGTCATC
CGCCAGGAAC TCCAGGATCT GCGCGACAAT TTCGCAACGC CCCGCAAATC CGAAATTCTG
GCCCATGATC CCGATTCCAT CGACATCGAA GACATCATTC CCGACGAGCC GGTGGTCATC
ACCCTGTCCC GCAACGGGTA TTTGAAGCGC ACCAGTCTCG ACAACTATCG CCAGCAGCGC
CGTGGCGGCA CGGGCATCAC CGGGGTGCAG GTCGCGGAGG AGGATTTCAT CACCTTCATC
CTGACGACCT CCAACCACCA GTACATGAAT CTGTTCAGCA ACAAGGGCAA GATGTACCAG
GTCAAGGTGC ACCAGATCCC CGAGGGCGGA CGCACGGCCC GGGGCAAGCA CGTGGCCAAC
CTGCTGCCGC TGGACAGCAA CGAATACATC GCCGCGGCCA TGACCTGCCG CGATCTGGAC
CAGGAGAAAT TCTACTTCTT CTACACCAAG CTCGGCGTGG TCAAACGCAG CTCCGTCCAT
CTCTATCGCA ACATTCGCGC CGTGGGTCTC ATCGCCCTTG GCATGCGTGA CGACGATGAG
CTTATCGGCG TGCGCGAGGT GGAAACCAAC GACGAGATGG TGCTGGTCAC GGTGGACGGC
TATTCCATCC GTTTCGCCTG CTCCGATGTG CGCGCCATGG GCCGCACCGC CACCGGCGTG
AAGGGCCTGG CCCTGCGCAA GGGCGATCAG GTCGTGGCCG GCGTGGTGGT CAACAAGGAC
ACTCAGCAGG AGCTTCTGAC CATCGCGGAG AACGGCTACG GCAAGCGCAC CCAGGTGGAG
CACTTCCGGG CCCAGTCGCG CGGCGGCAAG GGCATCATCA ACATGCGCAT CACTCCCAAG
ACCGGCAAGG TTGTCGGGGC CATGATGGTC TACCCCACGG ATGAGCTCAT CCTCCTGACT
TCGGGTAGCA AGATCATCCG CATCGGCATC TCCGACATCA GCCTGGTCGG CCGGGCCACC
CAGGGAGTGC GCCTGGTTCG CCTTGAGGAC GAACAGACCG TGGTCTGCTT CGACCATGTG
CCGACCGATG CTCCGGAAGT GAGCGGCGTT CCGCGTGCGG AGGTGCCTTC GCCCGATTCG
GATCCGGAAG ATTCCGTCGG CCCGGATGAT GTGGATCTGC CCGATGATGA CGAGATGCTG
GATGAAACCG ATGAGTCGCA GGAATAG
 
Protein sequence
MSNISIEKEL QKSYLEYSLS VIIGRAIPDV RDGLKPVHRR ILFAMHELGN TYNRAYKKSA 
RVVGDVIGKF HPHGDSAVYD ALVRMAQEFN MRDPLVDGQG NFGSIDGDSA AAMRYTEVRM
SKLAGSFLAD IEKDTVEFRP NYDNSLQEPS VLPTKVPNLL VNGSSGIAVG MATNIPPHNL
GEVVDGTLRL LDDPQMSIDE LMQYIKAPDF PTGALIYGKA GIREAYRTGR GSVRIRSRIE
IEKRKGDLES IVVKEIPYAL NKSTLVEKIA MLVNERKIEG ISDLRDESDM KGIRIVMDLK
KGVFSDVIVN QLFKFTSLET SFGINMMAVV NNRPQLLNVK QVLEYFLDYR REVVIRRSRF
DLRKAQHRAH ILEGLRIALD FIDEVVALIR ASKTPQEAKE RLRERFGLSE IQAQAILDMR
LQRLTNLERE KLLEEYAELL KQIEYLTSVI ENTEVLKSVI RQELQDLRDN FATPRKSEIL
AHDPDSIDIE DIIPDEPVVI TLSRNGYLKR TSLDNYRQQR RGGTGITGVQ VAEEDFITFI
LTTSNHQYMN LFSNKGKMYQ VKVHQIPEGG RTARGKHVAN LLPLDSNEYI AAAMTCRDLD
QEKFYFFYTK LGVVKRSSVH LYRNIRAVGL IALGMRDDDE LIGVREVETN DEMVLVTVDG
YSIRFACSDV RAMGRTATGV KGLALRKGDQ VVAGVVVNKD TQQELLTIAE NGYGKRTQVE
HFRAQSRGGK GIINMRITPK TGKVVGAMMV YPTDELILLT SGSKIIRIGI SDISLVGRAT
QGVRLVRLED EQTVVCFDHV PTDAPEVSGV PRAEVPSPDS DPEDSVGPDD VDLPDDDEML
DETDESQE