Gene Dbac_3062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3062 
Symbol 
ID8378757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp3465030 
End bp3465587 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID645002297 
Producthydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit 
Protein accessionYP_003159553 
Protein GI256830825 
COG category[C] Energy production and conversion 
COG ID[COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain 
TIGRFAM ID[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAT ACAATCTGCA AACTCCCCTG ACGGACGAGG CCATGGCCAA ACTCAAGGCC 
GGAGACGTGG TGCGGCTGAC GGGCACCATC TACACGGCCC GCGACGCGGC CCACAAGCGC 
CTCGTTGACC TTTTGGACAA GGCGGAGCCA CTGCCCTTCG AACTGAAAGG CTCGGTCATC 
TACTACGTGG GCCCCAGCCC CGCGCCTCCC GGCCGCCCCA TCGGCGCGGC CGGACCGACC 
ACCAGCTACC GCATGGACAC CTACGCCCCG CGCCTGCATT CGCTCGGCTG CAAGGCCTCG 
GTGGGCAAGG GCAAAAGAAG CGACGCCGTC AAGCAGGCCT TGAAAGACCA TACGGCCGTG 
TATTTCGGCG CCACGGGCGG CGCTGGAGCG CTCTTGTCCA AATGCATCAC GGCGGCCAAA 
GTCATCGCCT TCGACGAGCT TGGGCCGGAG GCCATCCGCG AACTGACCGT GGTTGACTTC 
CCGCTGCTGG TCATCAACGA TTCCCACGGC GGAGAATTGT ACGTGCAGCC GGACCGGAAG 
GCGGCTGGGC TGGAATAG
 
Protein sequence
MAEYNLQTPL TDEAMAKLKA GDVVRLTGTI YTARDAAHKR LVDLLDKAEP LPFELKGSVI 
YYVGPSPAPP GRPIGAAGPT TSYRMDTYAP RLHSLGCKAS VGKGKRSDAV KQALKDHTAV 
YFGATGGAGA LLSKCITAAK VIAFDELGPE AIRELTVVDF PLLVINDSHG GELYVQPDRK 
AAGLE