Gene Dbac_3034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_3034 
Symbol 
ID8378729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3432987 
End bp3433472 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID645002269 
ProductrfaE bifunctional protein 
Protein accessionYP_003159525 
Protein GI256830797 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000105513 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCG AGCAAAAAAT TACATCACCC GAGCAAATTG AAAGACCCGG CGACGGCGGC 
AAGGTCGTCT TCACCAACGG ATGCTTCGAC ATCATCCATC CGGGCCATGT GGATTATCTG
GAACGGGCCA GGAGCATGGG CGCCTGTCTG GTCGTCGGCC TCAACAGCGA CGCTTCTGTC
AGGCGGCTGA AGGGCGCGTT GCGGCCAATC AACGACCAGC AGAGCAGGGC GCGGGTCCTG
GCGGCCCTGG CCTGCGTGGA TTTCGTCATA CTTTTTGAAG AGGATACGCC TCTTGAACTC
ATCAAGAAAG TCCGACCCGA CGTGCTGGTC AAAGGCGGGG ACTGGAGCGT GGACCGGATA
GTCGGCAGGG ATGTGGTGGA AGCGGCGGGA GGGACGGTCT GTTCCATTCC GTTGCTGACC
GGATATTCGA CCACGGGAAC AGTGGAACGC ATTGTGGCCA TGCACGGGAG CGTGGGAAAT
GGATAA
 
Protein sequence
MNTEQKITSP EQIERPGDGG KVVFTNGCFD IIHPGHVDYL ERARSMGACL VVGLNSDASV 
RRLKGALRPI NDQQSRARVL AALACVDFVI LFEEDTPLEL IKKVRPDVLV KGGDWSVDRI
VGRDVVEAAG GTVCSIPLLT GYSTTGTVER IVAMHGSVGN G