Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2963 |
Symbol | rpsA |
ID | 8378656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3351383 |
End bp | 3353164 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645002196 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_003159454 |
Protein GI | 256830726 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000174303 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAACA CTCAAACCAC GCCAGAGTCC ATGAATGATT TCGACATGGA GATGGATTTT GAGTCTCAAC TCGAGAACTA TCTCAACTCC GATTTCGGTG ACATCGAAGA GGGAGTGATC GTTTCGGGCG AGGTCGTGAA GATTGATGAC AGCTACATTC TCGTGGATGT CAATTTCAAG TCCGAAGGTC AGATTCCACT CGATGAGTTC ATGGAAAACG GCCAGGTGAC TGTCAAAGTT GGCGACACTG TCGACGTATA TGTTGTCCGC AAAAATGAGC GCGAAGGCTC CATCGTCCTG TCCAGGGAAA AAGCCAAGCG CATGCAGGTC CTGGACGAAC TGGAAAAACT GCTCGACTCC GGCGATGTCG TGGTCGGCCG CATCGTGCGC CGCATCAAGG GCGGCTATGT TGTTGAAATC AAGGGAATCG AGGCCTTCCT GCCCGGCTCC CATGTCGATC TGCGTCCGGT TCCGGACATG GATGCCCTGG TCAACCAGGA TTTCGAATTT CGCGTGCTGA AGATCAATCG CCGTCGCAGC AACGTTATTG TTTCCCGTCG CGTGCTCCTT GAAGAAGATC GCGACCGCAA GCGCGGCGAA TTGCTGACCA CCCTCGAAGA GGGTCAGTCC GTAGTCGGCG TGGTCAAGAA CATCACCGAA TACGGCGTGT TCATCGACCT CGGCGGCCTC GACGGTCTGC TGCACATCAC CGACATGTCC TGGAAGCGCA TCAAGCATCC CAAGGAAATG GTCCAGCTGG GCGACGAACT GACTCTCAAA GTCCTGTCCT TCGACAAGGA CGAGAAGAAG GTATCCCTCG GCCTCAAGCA GCTGGTCATG GATCCCTGGG CCAACATCTC CGAGAAATAC CCCGAAGGGC ACAAGCTTTC CGGCAAGGTC ACCAATCTGG TGGACTACGG CGCGTTCGTG GAACTGGAAG CCGGCGTTGA AGGCCTGGTG CACATCTCCG AGATGTCCTG GACCCGCAAG CTGCGTCATC CTTCCCAGAT GGTGCGCCCC GGCGACGAAG TGGATGTCAT CATCCTCGGC GTGGACGTGG ACCGCAAGCG CATCTCGCTC GGCATGAAGC AGGTCGCTCC CAATCCCTGG GACCTGGTCG CCGAGAAGTA TCCTGAAGGC ACCATCCTTG AAGCCAGCGT CAAGAACATC ACCGAATTCG GCCTGTTCAT CGGCATCGAG GACGGCATCG ACGGTCTCAT TCACGTTTCC GACCTGTCCT GGACCAAGAA GATCCGTCAC CCCAATGAGC TCTACAAGGT GGGCGACGTT GTCCGCGCCA AGGTTCTGAC CGTGGACAAG GAGAACGAGA AGTTCACCCT GGGCATCAAG CAGCTGGCCG ACGACCCGTG GCTGGACGTG CCCAATCGCT ACCCCGTGGG CACCATGCTG ACCGGCACCA TCACCAACAT CACGGATTTC GGTCTGTTTG TTGAGGTTGA GGAAGGCATC GAAGGTCTGG TCCACGTCAG CGAGATGAGC AAGAAGAAGA TCAAAAGCCC CAAGGAAGCC TTCAACGAAG GTGACGCCAT CGAGGCCAAG GTCATTCACG TCAGCGCCGA CGAGCGCCGC CTGGGACTCT CTCTCAAGGC TCAGGAGCCT GAGCGCAAGC GCACCGGCGG TGCCGGTGAA TTCCGCACCA CGCAGAGCGG TTCCATGACC GGCAGCAACC TCGGCGATAT GATCCGTCAG AAGATGGAAG AGAATGCCGA GACCGGAGTC GAAGCCGACA CCGAGACCGA CGCCGAGACC GAAGAAGAAT AG
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Protein sequence | MNNTQTTPES MNDFDMEMDF ESQLENYLNS DFGDIEEGVI VSGEVVKIDD SYILVDVNFK SEGQIPLDEF MENGQVTVKV GDTVDVYVVR KNEREGSIVL SREKAKRMQV LDELEKLLDS GDVVVGRIVR RIKGGYVVEI KGIEAFLPGS HVDLRPVPDM DALVNQDFEF RVLKINRRRS NVIVSRRVLL EEDRDRKRGE LLTTLEEGQS VVGVVKNITE YGVFIDLGGL DGLLHITDMS WKRIKHPKEM VQLGDELTLK VLSFDKDEKK VSLGLKQLVM DPWANISEKY PEGHKLSGKV TNLVDYGAFV ELEAGVEGLV HISEMSWTRK LRHPSQMVRP GDEVDVIILG VDVDRKRISL GMKQVAPNPW DLVAEKYPEG TILEASVKNI TEFGLFIGIE DGIDGLIHVS DLSWTKKIRH PNELYKVGDV VRAKVLTVDK ENEKFTLGIK QLADDPWLDV PNRYPVGTML TGTITNITDF GLFVEVEEGI EGLVHVSEMS KKKIKSPKEA FNEGDAIEAK VIHVSADERR LGLSLKAQEP ERKRTGGAGE FRTTQSGSMT GSNLGDMIRQ KMEENAETGV EADTETDAET EEE
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