| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2896 |
|---|
| Symbol | gatA |
|---|
| ID | 8378589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3278158 |
|---|
| End bp | 3279624 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645002129 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_003159387 |
|---|
| Protein GI | 256830659 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGC TGTTCCATCA TTCCCTGACC CAGATTCGCG ACCTCCTGCG TGCAGGCGAA
ATCACCGCCC GGGAAGCCAC GGCCTCCTGC CTGGACCGCA TCGCAGCCAC CGAACCCAGG
CTGGACGCCC TCCTGCATGT GGCCGGAGAA GAGGCCCTGG CCCAGGCCAA ATCAATGGAT
GCGCACGGGC CGGACGCAAA GAAGCCCCTG TGGGGCGTCC CCGTCATCAT CAAGGACGTG
CTGGCCACGG TCGGCATGCC CACCACCTGC GGCTCCAAAA TCCTGGAGAA CTTCGTCCCG
GTCTATGACG CCGACTGCGT GACCAGACTT AAAGAAGCCG GGGCCATCAT CCTGGCCAAG
GCCAACATGG ACGAATTCGC CATGGGCTCG TCCACGGAAA ATTCCGCCTT CAAGGTCACC
AAAAACCCTT GGGACGTGAC GCGAGTACCG GGCGGGTCCA GCGGCGGCTC GGCGGCCAGC
GTGGCGGCCG GTCAGTGCTT CGCCTCCATC GGCACGGACA CGGGCGGCTC CATCCGTCAG
CCGGCCAGCT TCTGCGGCAT CGTAGGCGTA AAGCCCAGCT ACGGCCGAGT CTCGCGCCGG
GGGCTCATCG CGTATGGTTC CTCCCTGGAC CAGGCCGGGC CCATGACCCG CACCGTGGCC
GATGCGGCGG AAATTTTGCA GGTCATCGCC GGGCACGACC CCAAGGACTC CACCAGCGTC
GACACGCCCG TGCCCGATTA TCTGAAAGCC CTGAACCGGG GCGGTTCCCT GAAGGGCCTG
CGCCTCGGGA TGCCTGAACA GTACTGGGGC GAAGGCCTTT CGACCGAAGT GGACGCGGCC
TGCCGCAGCG CCGTCGAACT GGCCGTTTCC CTGGGCGCCC AAATCGTGCC CGTGTCCCTG
CCGCATACCG AATACGCCAT CGCCACCTAC TACATCCTGG CCATGGCCGA AGCCAGCTCC
AACCTGGCCC GCTTCGACGG GGTGCGCTAC GGCCGCCGCA GCAGCCAGAC CCAGGACCTT
GCGACCATGT ACACCCGCTC CCGCTCCGAA GGGTTCGGGG AAGAGGTCAT GCGCCGCATC
ATGCTCGGCA CCTATGTGCT TTCGGCCGGA TACTACGACG CCTACTACAG GAAGGCGGCG
CAGGTCCGAC GACTGATCCG CCAGGATTTC CTGAACGCCC TGGACAAGTG CGACCTGATC
TGCGGCCCGG CCTGCCCGAC CACGGCTTTT GCCATCGGAG AGAACACGGC CGACCCGCTG
CAGATGTACC TGACGGACAT CTTCACCATC TCCCTGAATT TGAGCGGACT GCCCGGCCTT
TCCCTGCCCG TCGGGCTCGG CAAAGACACC GGCATGCCGG TCGGCCTGCA GCTCTTCGCC
GGGAACATGG ACGAAGCGAG CCTTTTGTCC GCGGCCCAGA CTCTGGAAAC GCATCTGCCA
AAGTTGCCCG AACCGCCACT TGCGTAA
|
|---|
| Protein sequence | MSQLFHHSLT QIRDLLRAGE ITAREATASC LDRIAATEPR LDALLHVAGE EALAQAKSMD
AHGPDAKKPL WGVPVIIKDV LATVGMPTTC GSKILENFVP VYDADCVTRL KEAGAIILAK
ANMDEFAMGS STENSAFKVT KNPWDVTRVP GGSSGGSAAS VAAGQCFASI GTDTGGSIRQ
PASFCGIVGV KPSYGRVSRR GLIAYGSSLD QAGPMTRTVA DAAEILQVIA GHDPKDSTSV
DTPVPDYLKA LNRGGSLKGL RLGMPEQYWG EGLSTEVDAA CRSAVELAVS LGAQIVPVSL
PHTEYAIATY YILAMAEASS NLARFDGVRY GRRSSQTQDL ATMYTRSRSE GFGEEVMRRI
MLGTYVLSAG YYDAYYRKAA QVRRLIRQDF LNALDKCDLI CGPACPTTAF AIGENTADPL
QMYLTDIFTI SLNLSGLPGL SLPVGLGKDT GMPVGLQLFA GNMDEASLLS AAQTLETHLP
KLPEPPLA
|
|---|
| |