| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2874 |
|---|
| Symbol | |
|---|
| ID | 8378566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 3256653 |
|---|
| End bp | 3259241 |
|---|
| Gene Length | 2589 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645002106 |
|---|
| Product | alpha-glucan phosphorylase |
|---|
| Protein accession | YP_003159365 |
|---|
| Protein GI | 256830637 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAT TGCATGTTTA TACAGTTGTG CCCAAGCTTC CGGAAAAACT TCTGCCGCTC
AAGACGCTGG CAAGCAACCT CTATTTTTCA TGGCAACATG AAATCGAGGA ATTTTTTGCC
CAGATAGACC GCGAATTATG GGAAAAAAGC GAACACAACC CGGTCTGGTT CCTGAACCAT
CTGCCTCAGA GCACACTGGA AGAACTGGGC GAGGATGAAT TCTTTCTGGA CCGTCTGTCA
ACCATTGCGG CGGGTTTCGA AAAATACCTG TCCAAGCGCA GCCCCATGAC CGGACTCGAC
GCTCTTGAGA GCGGACCTGT GGTCGCCTAT TTCAGCGCCG AATACGGCAT CGCCCAATGC
CTGCCCGTGT ATTCGGGAGG GCTTGGCGTG CTGGCCGGGG ACCATCTCAA ATCCGCCAGC
GACCTGAACA TACCCCTGGT CGGAATCGGA TTGTGCTACC AGCGCGGATT TTTCCGCCAG
TACCTGACCC ACGACGGCTG GCAGCAGGAA CGCTATCAGG CCAACGATTT CGAGCAGATG
CCCCTCTCGG CGGTGCTGGA CGAGGACGGA CTGCCGCTGA AGGTGCGCTT CCAGATGCAG
GGCAGCCCGC TCTATTTCCG CGTCTGGCGG GCGGACGTTG GCCGCGTGCC TCTTTTCCTG
ATGGACACCA ATATCTCCGA AAACACGCCG GAACGCCGGG AGCTGACCTC CCAACTCTAC
GGCGGGGACC TGGAGATGCG GCTCATGCAG GAATATCTGC TCGGCATCGG CGGCATCAAA
GCCCTTGAGG CCATGGGCCT CTCCCCCCGG GTCATCCACA TGAACGAAGG CCACTCGGCT
TTTGCCGGCC TGGAAAGAAT CCGCGTGCTC ATGGAAGACC GCCACCTGTC CTTTGAGGCG
GCCCTGGAAC TGGTTGCCCA GAGCTCCGTC TTCACCACGC ACACACCTGT TCCGGCGGGC
AACGACCGTT TCTCCCCGGA ACTGATGGCC AAATACTTCC AGGAATATTC CGCGGACCTG
GGACTCTCCT GGAAGGTTTT CCTGGCCTTG GGCCGGGAAA ACACGCGCGA TGACGCCGAA
CATTTCTGCA TGACCATACT GGCCCTGCGC CTGTCCCGGT TCAACAACGG CGTCAGCCGG
CTGCACGGCA AGGTTTCGCG CAAAATGTGG GCCAATGTCT GGCCCCAGTA TCCCGAAGAG
GACGTGCCCA TCACCTGGGT CACCAACGGC ATCCATTTCC CGACCTGGGT GGCTCCTGAA
ATGTCGGTCC TCTACGACCG TTTCCTGGGC CAGTCGTGGC GTGAAGACCC GGACTGCGAG
AGGGTCGGCG AAAAATTCGG GTCCATCCCG GACATCGAGC TCTGGCGGGC GCACGAACGC
CTGCGGGAGC GTCTGGTCGA TTTTGTGCGC CGCCGCCTGC AGCAGCAGAT CATATCCCGG
GGCGGCCGCA GCTGGGAACT CGAAGCCGCG GACAATGTCC TCAATCCCGA GGCGCTGACC
ATCGGTTTCG CCCGCCGCTT CGCGTCCTAC AAACGCGCCT ACCTGCTGCT CAAAGACGAT
GACCGCCTAA AACGCCTCGT TACGGACCCC GCCCGCCCGG TACAGTTCAT CTTTGCCGGC
AAGGCCCATC CCCGGGACAA CGAGGGCAAG AAAATCATTC AGGAGCTCAT CAGCCTCTGC
CAGTCTCCGG AGAGCCGCGC ATCCATGGTC TTTCTGGAAG ACTATGACAT GCAGGTCGCC
CGCTACCTGG TCCAGGGCTG CGACATATGG CTCAACAACC CGCGCCGCCC TCTGGAGGCC
TGCGGCACCA GCGGCATGAA GGCCATGGCC AACGGCGTGC TCAACCTGAG CACCCTTGAC
GGCTGGTGGG ACGAGGCCTG GAGCCCGGAC AATTCCGTGG GCTGGGCCAT CGGCAACGCC
GAGGAATACG ACGATGTCGA ATACCAGGAC TTCGTGGAGA GCCAGACCCT CTACAACATC
CTCGAAAAAG ATGTCATCCC GCTCTTCTAC GACCGCGTGC AAGGCTCCTT CCCCAGGCGA
TGGGTGCAAA AGATGAAGCA GGCCCTCAAA ACCCTGGGGC CGGTCTTCAA CGGGCACCGC
ATGGTCGAGG AATACTCCAA GCGCGCCTAT CTCCCGGCCA ATATCAGCTA CGGCAAGCTC
TCGGCGGGCG GATACCGCCC GGTCATGGAC CTGGCCGACT GGCGCATGAA CCTGCTCACC
CACTGGGGCG GGCTCGATAT CCGTAACGTG CAGTGCGTCA CGGCCCACGA AATGTTTGTC
GGTGAGAACC TGGAGGTCAG CGCCGAGGTC AAGGTCGAGG GCCTCGGCAT CCAGGACATC
CGCGTGGAAA TCTACACCGG CCCCCTTGAT CACACCGGCA AATTCGCAAA CCGGTCCACC
TTCGCCATGA GCCCGGACGA GCGCACCGCC GACGGCTGGT ACATATACCG AGGCAAGGCC
ATGCCCATGG CCACGGGCAA ATTCGGCTTC ACCGTGCGCA TCCTGCCTCA CCACCCGCTG
CTGCGCGATG CGCACAGTCT GGGGCTGATC TTCTGGGCCG ACAACCCCGG ACCAAAACTC
CAAGGGTAG
|
|---|
| Protein sequence | MQPLHVYTVV PKLPEKLLPL KTLASNLYFS WQHEIEEFFA QIDRELWEKS EHNPVWFLNH
LPQSTLEELG EDEFFLDRLS TIAAGFEKYL SKRSPMTGLD ALESGPVVAY FSAEYGIAQC
LPVYSGGLGV LAGDHLKSAS DLNIPLVGIG LCYQRGFFRQ YLTHDGWQQE RYQANDFEQM
PLSAVLDEDG LPLKVRFQMQ GSPLYFRVWR ADVGRVPLFL MDTNISENTP ERRELTSQLY
GGDLEMRLMQ EYLLGIGGIK ALEAMGLSPR VIHMNEGHSA FAGLERIRVL MEDRHLSFEA
ALELVAQSSV FTTHTPVPAG NDRFSPELMA KYFQEYSADL GLSWKVFLAL GRENTRDDAE
HFCMTILALR LSRFNNGVSR LHGKVSRKMW ANVWPQYPEE DVPITWVTNG IHFPTWVAPE
MSVLYDRFLG QSWREDPDCE RVGEKFGSIP DIELWRAHER LRERLVDFVR RRLQQQIISR
GGRSWELEAA DNVLNPEALT IGFARRFASY KRAYLLLKDD DRLKRLVTDP ARPVQFIFAG
KAHPRDNEGK KIIQELISLC QSPESRASMV FLEDYDMQVA RYLVQGCDIW LNNPRRPLEA
CGTSGMKAMA NGVLNLSTLD GWWDEAWSPD NSVGWAIGNA EEYDDVEYQD FVESQTLYNI
LEKDVIPLFY DRVQGSFPRR WVQKMKQALK TLGPVFNGHR MVEEYSKRAY LPANISYGKL
SAGGYRPVMD LADWRMNLLT HWGGLDIRNV QCVTAHEMFV GENLEVSAEV KVEGLGIQDI
RVEIYTGPLD HTGKFANRST FAMSPDERTA DGWYIYRGKA MPMATGKFGF TVRILPHHPL
LRDAHSLGLI FWADNPGPKL QG
|
|---|
| |