Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2799 |
Symbol | |
ID | 8378487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 3178479 |
End bp | 3179786 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645002028 |
Product | outer membrane efflux protein |
Protein accession | YP_003159291 |
Protein GI | 256830563 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000194078 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATAT GGAAGTGCAG TCTGTGCCTG ATCGTTTTTT GCCTATTTTC TTTTTCTGCC TGGGGGGCAG AGACCTTGAC CATGCGAGAG GCGGTGGAGA TCGGGCTCAA GTCGAACCCT TCAATTCTGG CCGCGCGGGA GGCGCTTTCT GCGTCGGACT ATGCCGTCAA GTCGGCCAAG GCCGCCTTTG GGCCAGCCCT GAGCACCCAG TATGGCTACA CCCGGCTCGA TGAGCGGCCG CAGTCCCTTG GGTTCACCGC AGGCGCGCTT GACAACTGGG AGCTTGTCTT CAACGTGCAT CAGCCGCTGT TCACGGGATT CAACCTGCTG ACGACGCATG AAAAAACCAT TTTGCAGAAG GAGCAGGCCG CATCGCAGAT CGACAATGTC GAGTTGCAGC TGATCGTTGC CATTCAGGAC ACGTTTTTGC GTCTGTTGCA GGCCCGGGAG AATGTCCGCT CTGCCGAGGA TTCCCTTGTC CGTCTGCGGT CGCAGTTGAA GGTGAGCACC GCTTTTTACG AGGTTGGCCT GCGTCCAAAG CTCGATATGC TGCAGGCCGA GGTCGATGTG GCCAATGCCG AGCAGCTCAT GCTGTCCGCG AAAAACAATG AAGCGACGTT GAACGCGCAA CTCAACACCC TGCTTGGCAA GAGCGTGGAA GCGGACGTGG AGTATGCCGG GGAGTTGCGA TATTTTCCCA TGCCGCTGAC CCTTGAAGAA TGTCTGGCGC GCGCCGGGCA GCACCGTCCG GATCTGCGCA TTGCCCGGCA GTCCGTCATG TTGGCCGAAA AGGACAAGGT GCTCGCGGCG GTGCCGTATT ACCCGCAGGT CGGCGCGGAT TTCAACTACG TCCGGGCCGG AGAGGATCCC CTGGTGCACG GTGGAGACTA TCATACGCCC AGTCAGTGGA ACGCGCAGGT TGGAATGAAG TGGACTTTCT TCGAATGGGG AAAGACCTAC TACGGGGAAA AGCAGGCGGA AAAAAATGTG AGCCGGCTGG GTCAGGAATA TCTGAATCTT GAGAACGACG CCGCGTTTGA GGTCAAGAAG AGCTTTCTGC AGATTGAAAC CGCCGAAAAA CGCATCTCTG CCGCCAGGCA AGGGCTGATC GCCGCCAAGG AGAGCTACCG CATGGCCGTG GCCAGATACG AGGCCCAGGT GGGCACCAAT ACGGACGTGC TCGACGCCCA GGCCAAGCAG ACGCTCAGTG AAGCCAGTCT GCACGAGGCG CTTTCGGACT ATGAGCGGTC CGTGGCTGAA CTCTATGGAG CCATGGGCCA AAGAAATCCG GAACTTCTGG CGCAGTGA
|
Protein sequence | MKIWKCSLCL IVFCLFSFSA WGAETLTMRE AVEIGLKSNP SILAAREALS ASDYAVKSAK AAFGPALSTQ YGYTRLDERP QSLGFTAGAL DNWELVFNVH QPLFTGFNLL TTHEKTILQK EQAASQIDNV ELQLIVAIQD TFLRLLQARE NVRSAEDSLV RLRSQLKVST AFYEVGLRPK LDMLQAEVDV ANAEQLMLSA KNNEATLNAQ LNTLLGKSVE ADVEYAGELR YFPMPLTLEE CLARAGQHRP DLRIARQSVM LAEKDKVLAA VPYYPQVGAD FNYVRAGEDP LVHGGDYHTP SQWNAQVGMK WTFFEWGKTY YGEKQAEKNV SRLGQEYLNL ENDAAFEVKK SFLQIETAEK RISAARQGLI AAKESYRMAV ARYEAQVGTN TDVLDAQAKQ TLSEASLHEA LSDYERSVAE LYGAMGQRNP ELLAQ
|
| |