| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2790 |
|---|
| Symbol | |
|---|
| ID | 8378478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 3171004 |
|---|
| End bp | 3171846 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 645002019 |
|---|
| Product | modification methylase, HemK family |
|---|
| Protein accession | YP_003159282 |
|---|
| Protein GI | 256830554 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCCC GCAAAACACT ACTCGAGCAC TGGGAGCGAT TGCTGCAGCA AAGCGGTGTC
GACTCTCCCC GTCTTTCCGC GCAGGTTCTG CTTGCACACA TCCTCGGCAT GGAGCGGCTC
GACATGCTCC TTGATGTTGG CGCGCCTGTG GACGAGCCCT GCCGTTTGCG GATGGACGAG
CTCGGCGTGC GGCGGATGAA AGGCGAACCC GTGGCCTACC TTGTGGGTGA AAAGGAATTT
TACGGTTTTA CCTTTCGCGT TGGCCCCGGA GTGCTCATCC CCCGGCCCGA AACTGAGCTT
ATCCTCGACC ATCTGCTGGA ATCGCTAGAC ACGAATGCAC GTTTGCAGGT CCTGGATATC
GGCACCGGCA GCGGTGCTCT GGCCGTATCG TGCGCCAATC TTTTCCCTTA TTCTTGTGTC
GCGGCGGTGG ACATCTCCTT TGAAGCGCTC AAGGTCGCCT GCAAAAATGC GCTGCTTCAT
GATGTCCAGG ACCGGATTGT GTTCTTGCAG GGCGACCTGC TTGAATCCTT GCGCATTGAT
TCTTTTGACG TTGTTTTGGC AAACCTGCCT TATGTGCCGC TGACAACTAA GAAAACGCTT
AGTAGGGAAG TCCTCTGTCA CGAACCGCAT AGCGCGCTCT TTTCCGGGCT CGACGGCCTT
GATTGTTACC GTGCGCTGGC CCGCTCGCTC AGCGGTGCCA TGAAGCCTGG GGCCTTGCTG
CTGTGCGAAA TTGATCATAG CCAGGGTTTG GCCGTGATCG ACCTGTTTTC AGGGATTGCG
CAGAATGTGC GGATTTTGAA GGATTATGCA GGGCTTGATC GGCTAGCTAT TGTTGTTTTT
TAG
|
|---|
| Protein sequence | MPSRKTLLEH WERLLQQSGV DSPRLSAQVL LAHILGMERL DMLLDVGAPV DEPCRLRMDE
LGVRRMKGEP VAYLVGEKEF YGFTFRVGPG VLIPRPETEL ILDHLLESLD TNARLQVLDI
GTGSGALAVS CANLFPYSCV AAVDISFEAL KVACKNALLH DVQDRIVFLQ GDLLESLRID
SFDVVLANLP YVPLTTKKTL SREVLCHEPH SALFSGLDGL DCYRALARSL SGAMKPGALL
LCEIDHSQGL AVIDLFSGIA QNVRILKDYA GLDRLAIVVF
|
|---|
| |