Gene Dbac_2743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2743 
Symbol 
ID8378427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3132517 
End bp3134241 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content60% 
IMG OID645001968 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_003159235 
Protein GI256830507 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00277097 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATA CCCAGGCCGA CTGGAAACTA AAAACTCCTG CCCCCGAAGC AGAACTCAGC 
GTTGCTCAGC AAAGAGGCAT CGCCGAACGG CTTGAAGTGA GCCCCCTGCT GGTTCACTTG
ATGTCCCTGC GCGGTCTGGC CTGTGAATCC GACATGGACA AATTCCTGAG CCCCGGGCTT
CGCTACCTGC ATCCGCTGGA CAAATGGCCC GGCATCGAAG CAGGTGCGGC CCTGATCTGC
GCCGCGGTGA AGGAAAACCG CAGGATCGCG GTCTGGGGCG ACTACGATGT GGACGGAATT
ACCGCCACGA CGCTGGTCAT AGACTTCATG GCCCGCCGGG GCGTCGAGGT GAGCCATTAC
ATCCCCGACA GGCTTGACTT CGGTTACGGG CTGCATGTCG ACGGCATCCG CGAACTGGCG
GCCCAGGGTG TCGGTCTCCT GCTGACCGTC GATTGCGGCA TCGCCAACAT CGAAGAGATT
CGAGAAGCCA AGGCGCTGGG GATGCACGTC ATCATCACCG ACCATCACCT GCCCGGCCAG
GACCTGCCCG AGGCCGAGGT CATCATCAAC CCCAAGCTCG AGGGCTGGCC CACTCCCAAC
CTCGCCGGGG TCGGAGTGGC TTTTCTGCTC ATGGGCGCGG TAAACCGTCT CCTCCCCGGG
GCCGCGGTGG ACATCCGCGA TTTCCTGGAC CTGGTCGCCC TGGGCACAGT CGCCGACGTT
GTCCCCCTGG ATGAACAGAA CAGAATCCTG GTCAAAAACG GGCTTCTGCT GATCAAGGAA
GGCCGCCGTC CCGGCATCCA GGCCCTCAAG GAAATCAGCG GACTTGGACC TGACGACAAC
GTGGGTACAG GCTCCATCGG CTTCGCCCTG GCGCCCCGCA TCAATGCCGC CGGCCGCATC
GGCGACCCGG ACCTCGCCGT ACGCATGCTC TTGGCGACAG ACCCGGAGGA AGCACGGCAG
CTGGCCACGA AACTCGACAA ACTCAACGCC AAACGCAAAC TCGAAGAGCA GCGCATCCTG
GAAGAAGCCA TCACCCAGGC CGAGTCACAG CTTCACCTGC CCGGCCTCGT GCTGCATTCC
GAACACTGGC ACTCAGGCAT CATCGGCATC GTGGCCTCGC GCATCGTGGA GCGCTTTCAT
CGCCCGTGTC TGATCCTGAC CAAAGAAAAC GGAATCTTCA AAGGCTCGGG CCGCTCCACC
CCCACCTTCG ACTTGTATCA GGCCCTCCTG TCCTGCAAAC AGTGCCTCTA CAAATTCGGT
GGCCACCGGC AGGCCGCAGG GCTGAAACTC GAACCATTCC AACTGGCCAA TTTGAAAAAT
CTTTTTGCCT GGGCCGTGGA AGAGCAACTG GGCGCAAACC CGGCCCCGCC AGTCCTGGAA
CTGGACGCGG AACTGCCCTT TGCCTTGATC ACGGCCACGT TGCTCAAAGA ACTTGAACTC
CTGCAGCCCT ACGGCCAAGG AAACCCGAGG CCCATTTTCC TTTCCCCGCC GCTAAGCATC
CTCAAACATC GTTTTTTCAG TCAAAAGAAA CACTTGGAGC TGCATTTGTC CGACTCCAGC
GACGGAACGA ACATGCGCGC CGTGGCCTGG AGACAGGGAG AACGCTGGCA GGATGCATCT
TTTACGGGCA AACAGATCAA GATCGCCTAC ACTCCGCGGC TGTCGAAATT CAATGGACTG
CAACAGATCG AGCTGGCCGT GCAGGACATC CTGTCTTTGG AATAA
 
Protein sequence
MSDTQADWKL KTPAPEAELS VAQQRGIAER LEVSPLLVHL MSLRGLACES DMDKFLSPGL 
RYLHPLDKWP GIEAGAALIC AAVKENRRIA VWGDYDVDGI TATTLVIDFM ARRGVEVSHY
IPDRLDFGYG LHVDGIRELA AQGVGLLLTV DCGIANIEEI REAKALGMHV IITDHHLPGQ
DLPEAEVIIN PKLEGWPTPN LAGVGVAFLL MGAVNRLLPG AAVDIRDFLD LVALGTVADV
VPLDEQNRIL VKNGLLLIKE GRRPGIQALK EISGLGPDDN VGTGSIGFAL APRINAAGRI
GDPDLAVRML LATDPEEARQ LATKLDKLNA KRKLEEQRIL EEAITQAESQ LHLPGLVLHS
EHWHSGIIGI VASRIVERFH RPCLILTKEN GIFKGSGRST PTFDLYQALL SCKQCLYKFG
GHRQAAGLKL EPFQLANLKN LFAWAVEEQL GANPAPPVLE LDAELPFALI TATLLKELEL
LQPYGQGNPR PIFLSPPLSI LKHRFFSQKK HLELHLSDSS DGTNMRAVAW RQGERWQDAS
FTGKQIKIAY TPRLSKFNGL QQIELAVQDI LSLE