Gene Dbac_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2727 
Symbol 
ID8378411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp3116790 
End bp3119051 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content59% 
IMG OID645001952 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_003159219 
Protein GI256830491 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGC AACCTGAGGA GAGCGCGCCA AGCGCCACAT CGCTGCGCGA CAAGATCGTG 
GGGCTGAGCG AATCTTCAGG AAGAAAAAGC TACTACCCCA TGCTGCAGCA AAAGATCCGG
GAGCTGCAAA GCGAGATCGC CGAGCGGCAC CGGGCCGAAG ACGCCCTGCG CAAAACCCTC
CAACGCATCG AACGGCAGCA GGCCGTCATC GCCGAAATTT CCACGCATCC GAGCGTCTTT
CATGGCCGCC TGCAAGAAGC CGCGCCCATG ATAACGACCA GAATGACCCA CGCCATGGAC
GTGACCCGGG CCAGCTTGTG GATAATGCGC GCGGGCAGCC TCTGCTGCAT GGACAAGTTC
GACGCGCAGG GAGCGGTTCA CACCTCCGGA ACCTGCCTGG AGTGCGACAG ATTCGACGCC
TACTTCAAGG CGATCAGCAA AGGTCCGGTC ATCGTGACCG ACGCCCGCCA GGACCCGCGC
ACCCGCGATT TTGTCCCGAA CTACCTCGAA CCAAGCGGAA TCGCGTCCAT GCTCGACGTA
CCGGTGCTCA TCGACGCGGA ACTGACCGCC GTCATCTGCT TCGAGCATGT CGGGGAACAG
CGCGTCTGGC AGCCCGATGA AATCACCTTC GCCAGCCGCA TCGCCGATCA GGTGGCCCTG
ATCCTGGCCA GCAAACGCCG ACGCATCACG GAGGAGCAGT TGCAGAGCGC CCACGCCGAA
CTGACGCGCA ACCTGCGCTT CACGGAAGTG TTGCTTGACG CCATCCCCAT CCCGATCTTC
TACAAGGACT CGGAACTGCG CTATCTGGGC TGCAACCAGA CGTTCACCGA CATCATGGGC
ATTACTTCCG AAGAAATCCG AGGCAGGACA GCCCACGAGT TGTGGCCGGA CCTGGCCAAA
CCCTATGACG AAAATGACCG CAGCCTGCGC CAGGACACCC GCAAAAGCAC CTACGAATCG
AAAATACGAA ACAAAAATGG CGAATTACGC GAAGTCATCT TTGCCAAGCA GATTTTTTTT
GACGAATTCA AGCACGCAGA AGGCATCATC GGCTCCTTCG TGGATATCAC GGAGCGCAAC
CGCGCCGCCA AGGAAACGTC GCGCTTGCGC ACCCTGCTCG CCAACATAAT CAACTCCATG
CCGTCCATGC TGATCGGGGT CGATGCCGAC GGGCGCATCG CGCAATGGAA CCAGCAGGCA
GCCCTGGTGA CCGGCGTGAA CGAGGCGCAG GCGCAAGGCA GGCCCCTTGC GCAGGTCGTG
CCCTGGCTTG GCTCCGAGAT GAAGAAGATC CGCCAGTCCA TCGCCAGCAA AAAACCCTTT
TTCGAGGGCA AGCTGAGCAG AGTGGAAAAT GGCGAAACCA TGTTCGAAGA CGTGACCATC
TATCCCTTGA TCACCAACGG AGTGGAAGGG GCGGTCATCC GCATTGACGA CGTGACCGAC
AAGGTCCGCA TCGAAGAAAT CCTGATCCAG TCCGAAAAAA TGCTCTCCGT CGGCGGTCTG
GCCGCGGGCA TGGCCCACGA AATCAACAAT CCTTTGGCCT CCATCATGGG CAATACCCAG
GTCCTGGAAA CCAGGCTCCT CTTGCCGCTG CCGCAGAACG AGCAGGCGGC TCGGGAAGCA
GGCATCACCC TTGAAGCCCT GCATGCGTAT CTGGAGAGGC GGGGGATTCC GAAGATGCTG
AGCTCCGTTC GCAGCTCGGG AGCGCAAGCC GCGCAGATTG TCAGCAACAT GCTGAGTTTC
AGCCGCAAGA GCGAGCCGGT TCTGACTCCG GAAAGCATCA CGGAACTGCT CGAAAAAACG
CTGGACCTTG CCAGTACGGA CTATGACCTG AAAAAAAACT ACGACTTCAA GAAAATCCAG
ATCGTGCGCG AATATGAAGA CAATCTCCCC AAGATCCACG GATCGGCAAG CAAGCTGCAA
CAGGTTTTCC TGAATCTGCT GCGCAATGGC GCCGAGGCCA TGGGCGAAAA AATCTACCCT
GAAGGCCGAG GTCCGCAATT CACACTGCGC GTGAGAGGGA ATGCGCCGTG GGTGCGCGTC
GAACTCGAAG ACAACGGACC GGGGCTTGAA GAGTCTGTGC GCAAACGCGT GTTCGAGCCG
TTTTTCACCA CGAAGTCCGT GGGCAAGGGC ACGGGGCTCG GGCTGTCCGT CTCCTATTTC
ATCGTCACCG AGGAACACGC AGGCATGATG GCCGTGCAGA CGGCCAGGGG AGAATGGACC
AGATTCGTCA TCGACCTGCC GGTCGCGGCG TCATCAGAAT GA
 
Protein sequence
MKKQPEESAP SATSLRDKIV GLSESSGRKS YYPMLQQKIR ELQSEIAERH RAEDALRKTL 
QRIERQQAVI AEISTHPSVF HGRLQEAAPM ITTRMTHAMD VTRASLWIMR AGSLCCMDKF
DAQGAVHTSG TCLECDRFDA YFKAISKGPV IVTDARQDPR TRDFVPNYLE PSGIASMLDV
PVLIDAELTA VICFEHVGEQ RVWQPDEITF ASRIADQVAL ILASKRRRIT EEQLQSAHAE
LTRNLRFTEV LLDAIPIPIF YKDSELRYLG CNQTFTDIMG ITSEEIRGRT AHELWPDLAK
PYDENDRSLR QDTRKSTYES KIRNKNGELR EVIFAKQIFF DEFKHAEGII GSFVDITERN
RAAKETSRLR TLLANIINSM PSMLIGVDAD GRIAQWNQQA ALVTGVNEAQ AQGRPLAQVV
PWLGSEMKKI RQSIASKKPF FEGKLSRVEN GETMFEDVTI YPLITNGVEG AVIRIDDVTD
KVRIEEILIQ SEKMLSVGGL AAGMAHEINN PLASIMGNTQ VLETRLLLPL PQNEQAAREA
GITLEALHAY LERRGIPKML SSVRSSGAQA AQIVSNMLSF SRKSEPVLTP ESITELLEKT
LDLASTDYDL KKNYDFKKIQ IVREYEDNLP KIHGSASKLQ QVFLNLLRNG AEAMGEKIYP
EGRGPQFTLR VRGNAPWVRV ELEDNGPGLE ESVRKRVFEP FFTTKSVGKG TGLGLSVSYF
IVTEEHAGMM AVQTARGEWT RFVIDLPVAA SSE