Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2724 |
Symbol | |
ID | 8378408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 3114145 |
End bp | 3114957 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645001949 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_003159216 |
Protein GI | 256830488 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCTCC TAGGCATCAT CGGCCACCCG CTCTCGCACA CCTTGAGCCC CATCCTGCAC AACTGGGGGT TCCGGGAAAT GGGCATCAAG GCCTCCTACC ACGTCTGGGA CACCCCGCCC GAAAAGCTCC TCTCCTTCAT GGCCGCCCTG CGCACTCTGC CCATCCACGG GACCAGCGTG ACCATCCCGC ACAAGGAGAC GGTCATGCCC CTGGTCGACA AGCTGACGCA AAGCGCCCGC GACATCGGTG CCGTAAACAC CCTCTACTGG CACGACAAGG TGCTGTGGGG CGACAACACG GATGTGACCG GGTTCATGGC CCCGCTCCTG GAGCGCGGGA CGCAGCCGGG CACGGTGCTG GTCCTGGGCG CAGGCGGGGC CGCCCGCGCG GCGGTCTGCG GCCTGCACAG CGCAGGATGG AAGGTGCTTC TTTCCGCGCG CACGGGAGGC CGGGCCGACC GCCTGGCCCA ATCATTCCAG GCCGAGCATG TGCCCTGGGC CGACCGGCAC GAAGTGCGGC CGCACCTGCT GGTCAACACC ACCCCGCTTG GCATGTCCGG GCCCTTCCAG GCCCTCTCGC CCTGGAAATC GTCCCTGGCG GGCATATCCC TGGTCTACGA CCTGGTCTAC AACCCCAAGG AAACCCAGCT GCTGGCCCAG GCCCGGCGTG AAGGCGTGGA GATCATTCCC GGCTTGCCCA TGTTCGTGCA TCAGGGGCTG GCCCAATTCG AACGCTGGAC CGGACAGCGC TTCCCCCTGG CCCGCGCCAT CTCCCTGCTT GAAGAAACAC TGGCCGGCCG GAGCAAGGCA TGA
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Protein sequence | MLLLGIIGHP LSHTLSPILH NWGFREMGIK ASYHVWDTPP EKLLSFMAAL RTLPIHGTSV TIPHKETVMP LVDKLTQSAR DIGAVNTLYW HDKVLWGDNT DVTGFMAPLL ERGTQPGTVL VLGAGGAARA AVCGLHSAGW KVLLSARTGG RADRLAQSFQ AEHVPWADRH EVRPHLLVNT TPLGMSGPFQ ALSPWKSSLA GISLVYDLVY NPKETQLLAQ ARREGVEIIP GLPMFVHQGL AQFERWTGQR FPLARAISLL EETLAGRSKA
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