Gene Dbac_2719 details

Gene Information

• Locus tag: Dbac_2719
• Symbol: queA
• ID: 8378403
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 3110309
• End bp: 3111394
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 645001944
• Product: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
• Protein accession: YP_003159211
• Protein GI: 256830483
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase)
• TIGRFAM ID: [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.491737
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGCTA TTGACCCGGA ATTCAATCTT CAATCGTACG ATTTCGACCT GCCCGAGGCC 
CAGATCGCCC AGGACCCGAC CGCAAAGCGC GGCGCCTCGC GGCTGCTGGT GCTGGACCGG 
AAAAGCGGGA CGGTGCGCGA CGCCATGTTC GCAGACATCC CAGAGCTTCT CCCCACTGGC 
GCGCTGCTGG TCGTCAACAA CACCAAGGTC CTGCCCGCCC GGCTCATCGG ACGCAAGGAG 
TCCGGCGGCA AGGTCGAGTT CCTGCTGCTC ACGCCCCTGA CGCTGATCGA GGCGAAGACC 
GCAGCGGACG GCACGAAAAC AGCCACGGCC GAAGGCTTGC TCAAGGCATC GAAAGGCCCC 
AGGCAAGGCG ATCTGCTCCT TTTCCCGGGC ATTGAACTGC GCGTGCTCGA AAAGGGCGAG 
TTCGGAAGGG CGCGGGTTAC GCTGCGCTGG ACCGGCGACC TGGCCGAACA TTTCCTGAGC 
CAGGGGCACA TCCCCCTGCC CCCCTACATC CACCGCGAGG ACAAGAGCGA GGACCGCACC 
CGCTACCAGA CCGTCTATTC GCGGGAAGAC AAGCTCGGTT CCGTGGCCGC GCCCACGGCC 
GGGCTGCACT TCACCCCGGA GATCATGGCT TCCCTGGCGC AGCAAGGCAT CCAGCTCGCC 
GAGGTCACCC TCTATGTCGG CTACGGCACC TTCAGTCCGG TTCGCTGCGA TGATATCCGC 
GAACATGTCA TGCACGCCGA ATATGCCGAA GTACCCGAAG AGACTGCCCG CGCCATCGCC 
AAGGCCAAAA GCGAGGGACG GCCTGTAATC GCCGTGGGCA CGACCACCTC CCGGACACTG 
GAGAGCATGG CCTCGGCCCT GGGAGAGATC GGCCCGTTCA AGGGCTGGAC CGACATATTC 
ATCCACCCCG GGTACGAGTT CAAGGTCGTG GACCAGCTCA TCACCAACTT CCACTTGCCC 
CGCTCTTCCC TAATCATTAT GGTCTGCACA CTCGCGGGCA GGCAACAGAT TATCGATGCC 
TACAACCATG CGATTAAGCA GGGTTTTCGC TTTTTTTCCT ACGGCGACGC CATGCTCATC 
CGTTGA 

 

Protein sequence

MTAIDPEFNL QSYDFDLPEA QIAQDPTAKR GASRLLVLDR KSGTVRDAMF ADIPELLPTG 
ALLVVNNTKV LPARLIGRKE SGGKVEFLLL TPLTLIEAKT AADGTKTATA EGLLKASKGP 
RQGDLLLFPG IELRVLEKGE FGRARVTLRW TGDLAEHFLS QGHIPLPPYI HREDKSEDRT 
RYQTVYSRED KLGSVAAPTA GLHFTPEIMA SLAQQGIQLA EVTLYVGYGT FSPVRCDDIR 
EHVMHAEYAE VPEETARAIA KAKSEGRPVI AVGTTTSRTL ESMASALGEI GPFKGWTDIF 
IHPGYEFKVV DQLITNFHLP RSSLIIMVCT LAGRQQIIDA YNHAIKQGFR FFSYGDAMLI 
R