Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2663 |
Symbol | |
ID | 8378347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 3051425 |
End bp | 3053686 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645001889 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_003159156 |
Protein GI | 256830428 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCACT CTCAAGCAGA AATCATGCAC GCCGCAACCC CACCGATTTT CGAACTCAAA AAATTCCTGC ACGCCCATAA TTGGCTGAGC ATTTTCATAT TTCGTCTCAA AGACTTCGGG CTCTGCCGGG AACTCTACGG AGACCATGTC GCCGAAGAGT TGGAGAACCT GCTGATCAAC GCATTGAACC AGCACGATCC GGGCAGTCCT ATGCTCAACG CCAGGCACGC GTTACGAATC TCTTGCGGCG AGGCGGTGCT TATCCGTTGT CTGGGACAGG CCGGGGATTC TCAGCTCATG GACCAGGCCT TCAGCCTCAA GGTCAAGCTG CAGGCCATAC TCAGAAAGCA CACCATCTCA TCCCTCGGCA GGGAATTCGA GATCGAGGTG GGATTCGCCA TGCTGCCGGA ATCCTCACTT TTCGAGCGGG AGCGGATTTT CCACGAGGCC ATTCGCGATG CGCGACGCAT GGCCCAGGGC GGAATCGATC TTGAAGCGGT CAAGCTCTCG TCGACCTTCC GCTCCATCAT CCGCAACGGA CAGATCCGCA TGCTCTTCCA GCCCATCTAC GACTTCAAGA CCGGGGCGGT CATGGCCTGG GAAGCATTGG CACGCGGGCC GCGGGGGTCC GATTTCGAGT CGCCGTCGAT CCTCTTTGAT TTCGCCGAAC AGTTCGGACA GCTCTTCGCC TTGGAGCAGG CCTGCCGTTC CAAGGCCATG GAAACGGTGG GAACCCTGGC GTCAGGTCAA CGGCTGTTCC TGAACATTCA TCCGCGCACC GTGGTCGACC CGACCTTCGC GCCCGGCAAG ACCCTTGAAA TTCTGGACAA GCATGGCCTG AGACCCGAGG ATATTGTCTT TGAAATCACC GAACGCCATT CCATCAAGGA CTTCACCTCG TTTCACAAAA CCCTGGACCA TTATCGCAGC CAGGGTTTCA AGATCGCCGT GGACGATGCC GGAACGGGCT ACTCGGGCCT GTCCACCGTC GCGGCCCTGA AGCCGGACTT CATCAAGGTC GACATGTCGC TGGTGCGCGA TGTGGACAAG GACCCTGTGC GCAGGGCGCT GATGGAGACC ATGGTCACCC TGGCTGGCCG CATCGGCTCG GAGATCATCG CCGAAGGGAT CGAAACCAAG GGCGAGGCCC GGACATTGAC GGAGATCGGA GTCCATTTCG GCCAGGGGTA TTACCTGAGC CGCCCGCATT TCCCCAAACC CGAGACCCCG CTGGACATGA AGGAGCTTAC CCCGCTTCGT TCGGACAACT TCGGCAGGCT CTCCTGCTCG ATCCCCATCG GACAGCTGGT GCAAAAGACG CTGACGGTCA GCCCGCGTAC TCCGGTCCAA TCAGTGCAGC GGATCTTTGC CACAAATCCG GCGCTCTCAA GCGTGGTCGT CGTCGAGGAT GGGATACCCC GTGGGCTGGT CATGGGCTAC AGCCTGGACC GGCACCTGGC CACTCTTTAC GGGCGCGCGC TGTACGCGGA AAAGCCCGTG GCCGTGCTCA TGGACACCAC GCCCATGATC GTCGACGAGC GCGAACCCGT GGAATCCGTG GCCAAGGACG CCAACACCCG CGAAATGCTC AAAGCCTACG ACGAGGTCAT CGTCACCAGC GGCGGACAGT TTCTGGGCGT GGTAACGGTG CAGAAGATGC TGACCACCCT GGCGCAGGTG CAGGTCGAGA TGGCCAAGGG TACCAACCCC CTGACAGGCA TTCCGGGCAA CGTGGCCCTG GAAAAGGAAA TCGAGACACG GCTCAGAAGG GCCAAGCCCT TTTGCATGCT TTATGCGGAC CTGGACAATT TCAAGGTGTA CAATGACGTC TACGGCTTCA AGGACGGCGA CTTTGTCATT CTGCTGCTGG GCCGCATCAT GACCTGGGCC ATCTCCCGGC ATGGGCACAG CGGAGACTTT CTGGCCCACA TCGGCGGGGA TGACTTCGTG GCCATGGTCA ATCCGGAAAA GGCGGAACGC ATCTGCCAGG CCGTGACCCG CTGCTTCAAG AGGCTCATCC TGAACTGCTA CCATACCCAG GACCGCGCCA GAGGATGGAT CATGGGCAAG GGTCGCGACG GCAAGGAACA GCAGTTCCCG CTTGTCTCCG TCTCCATCGG CATCGTGGAC TGCATGGCTC CGTGCAGTCT GCAGGCCCTG GGGGAAAAAG CGGCCCAGAT CAAGGGCTAC GCCAAGACCC TGCCCGGCAA TGTCTATGTC CGTGACCGGC GTGGCAGCTC CGGATGCGGA CAGGCGGCCT GA
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Protein sequence | MSHSQAEIMH AATPPIFELK KFLHAHNWLS IFIFRLKDFG LCRELYGDHV AEELENLLIN ALNQHDPGSP MLNARHALRI SCGEAVLIRC LGQAGDSQLM DQAFSLKVKL QAILRKHTIS SLGREFEIEV GFAMLPESSL FERERIFHEA IRDARRMAQG GIDLEAVKLS STFRSIIRNG QIRMLFQPIY DFKTGAVMAW EALARGPRGS DFESPSILFD FAEQFGQLFA LEQACRSKAM ETVGTLASGQ RLFLNIHPRT VVDPTFAPGK TLEILDKHGL RPEDIVFEIT ERHSIKDFTS FHKTLDHYRS QGFKIAVDDA GTGYSGLSTV AALKPDFIKV DMSLVRDVDK DPVRRALMET MVTLAGRIGS EIIAEGIETK GEARTLTEIG VHFGQGYYLS RPHFPKPETP LDMKELTPLR SDNFGRLSCS IPIGQLVQKT LTVSPRTPVQ SVQRIFATNP ALSSVVVVED GIPRGLVMGY SLDRHLATLY GRALYAEKPV AVLMDTTPMI VDEREPVESV AKDANTREML KAYDEVIVTS GGQFLGVVTV QKMLTTLAQV QVEMAKGTNP LTGIPGNVAL EKEIETRLRR AKPFCMLYAD LDNFKVYNDV YGFKDGDFVI LLLGRIMTWA ISRHGHSGDF LAHIGGDDFV AMVNPEKAER ICQAVTRCFK RLILNCYHTQ DRARGWIMGK GRDGKEQQFP LVSVSIGIVD CMAPCSLQAL GEKAAQIKGY AKTLPGNVYV RDRRGSSGCG QAA
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