| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2600 |
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| Symbol | |
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| ID | 8378279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2960773 |
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| End bp | 2963706 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645001821 |
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| Product | diguanylate cyclase with beta propeller sensor |
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| Protein accession | YP_003159093 |
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| Protein GI | 256830365 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAACCC TGATTTTCAT ACTCACATTG CTACTTATCC CGCAACCAGC GCGTGCCATC
CCGGATATTC CCCTTGATGT CAGTAAGTTG GATATTTCCT TCGAGCGGGG CAGCCACAAC
AGCGTCATCG CCTCCGCCCA GGATTCCCAA GGCTATATTT GGCTGGCCTC CATTCGCGGC
CTGCATGTGT ATGACGGTCG GGCGTTCCGT CCCGTGCTCA ACGAAGTATT GCAGGGAAAT
AACATTCGAG ACATTCGGAT CGACGCCAAC GACGTCCTGT GGGTGGGCAC CAATTCTGGC
GTGCTCGCCT ACCCGCTGGC AACAAAAACC CCGCGCTGGT ACCAGATGGC CAAGACACCC
GCAGGGTTCC CCGCCACAAG CGCCAACATC ATCTACCAGG ATCAGAAAGG CTCTCTCTGG
GCGGGAACAG GCAACGGCGG GCTGCACCGC TACGAGCCCT CCTTCGACAA ATTCGAGAGG
ATCGACATCA TCCCCCCGGA TCCGGATACT CCCTGGACGG TTTTCGACAT CGCCGAGAAT
GCCCAGCGCG ACATGTGGCT GGGCACGGGA CAGGGCGTAC TTCGGTTGAC AGGCACCAAG
GGTCTGGCCA CGGCCATTCC CTTGTCCACG GGCGAATCCT ACTCTGCCAA AAAAATCACC
TTTGACGGCG CGGGCAACCT CTGGGTCGGC GTAGCGGGTA AAGGCCTGTG GATTCTGCCG
GCGCAGGCCT CGCAAAATGA ACTCGTTGCC GTGGACGAAC TGAAGACGGC ACGCATCCTC
GATCTCTACA CCGACAGCAA CGGCGACGTC TGGATTGCCA CAGCCCAGGG GCTGTTCCGA
TATGGCTTTC GCCAAGGCAG CATTTTTCAC CACCCCTTCC GCATACCCGG TTCGCAGGGC
AAGACACCCC GCTCCATCGC ATCCTTCATG GAAACAAAAG CAGGGACGCT ATGGATCGGA
ACGTACAATC ACGGGGTGTT GCACCGTCCG CCCTATCCCG GCGCGAAGCT GCTTGAACTG
AGGATCAAGG GCCAAAGCGA ACCGGTGCAA AACGCCGACA TCATCTGCGC AACCAGCCCG
GACTCCCGCG TCTATGTCGG TCTCAAGCAA GGCGGCGTTT ATCGCTCCGC GCCGCTTGAC
GTTAATCAGA TATCCTTGTC GAACAGTATC GAGATCGAAC CATTTCTCGA CGCGCCGAGA
GTCAACGCGC TGGTCTGGAG CACCGACAAT TCCCTTCTTT GCGGCGCCAA GAATGCCCTT
TTGCGTGTCA CTCCCAATGG TGAGGCGGAG CATAAGCAGC TCGTTTTTAA CGACCCCGAT
CCATCATTGT CGACTCACTC CGTTCGTCAC ATCGCCCTCA TGGATGACGG ACGCATCTGG
GTCTCCAACA CCAAAGAGCT CTATTCCTGG AAACCCGGCG ACACCGACGT GCGCAAAGAA
CTGACCTTCC CCCCGCAAGC GGGAGGTGCA TCGGTCATGC GGTCCGGCGC CGAGCTTTGG
GTCGCTTATG GGAGCACTCT TCACAAAATC GATCCCCGCT CCGGGCACCA GCGCATGTAT
GCGCTGCCGG AACCGGCAAA CACGGAAGAG GCCATGAGCG TCAAGAGCTT GCTCATGACA
CGCTCCGAGG AATTGATTGT CGGGACAACG AAAGAGCTGC TCCGCTACAA CCTGCGCTCA
GGAACCGCCA CTCCCGTCCA CACGATAGGA AACGAGCACA TTCCGAACGT CCTGTCGCTC
TGGGCCGACA AGGACGGAGG TACCTGGATG CATACCCAGA CAAAAATCTA CCATCTTCCG
CCCGGATCAA ACCAGGCCCG GGAGATGGCT ATCGGAGCAA GACACCCCGC CTCCAGCATC
ACCGCGTCGC CTGCGGTTCT GGACAAGATG CTTGTCTACG GACATTCCGA CGGGCTGTTG
CTCGTCGATC CGCAGCAACT TTTCTCCCGT CCGCCCACGC TCCCCAAAAT ATCCGAGATC
CGCATTTACG AGCGCAAGGT GCCCGCCACC CCTTTAGGCC GCATGCCCAA AGCCCTGGAG
CTCGACCATC TTCAAAACTT CCTGTCCTTT TCTTTTTCCA TGCCCGAAAT CAGCGCCTTG
GACGCACCCC GTTTTGTCTA CAAGCTCGAA GGCGTGGACT CCGCCTGGAC CGACGCCGGA
ACGCAGTCGT CAGTCAGCTA CGCGCACTTG CAGCCGGGTC GCTACGTGTT CCATCTCAAA
GACGGCTTTG ACGGCCCTGT CACCGAGTCC GTGAGCATCA CCATTCATCC GCCCTGGTGG
CTGACGGTGT GGGCCAAGAC AAGCTATGCG CTTTTCCTTG CGCTCACCTT CCTGATCTCG
TCGTTGCTGC TTGCACGCCT GCAGACCGCC CGCATCCGCA AGGACATGCT CGAAAACCTG
GTCATGCAGG ACCCGCTGAC CGGAGTGCCC AACCGACGCA AATTCCAGGA AGTGCTTGCA
GCCGAAAAAA GCCGCTGCAA ACGCAGCAAC CACCAGATCT CGGTGCTCAT GATCGACATT
GATTATTTCA AGGGGTTCAA CGACCGCTTC GGCCATCAAG CCGGCGACTT GGCCCTGCGC
AGCGTCGCTC AGACCCTGAA CGCCACGCTC AAGCGACCGG AAGATTTCGT GGGGAGATAC
GGGGGGGAGG AATTCGTGGT GGTATTGCCC AGCACCAATC GGAGCGGAGC GGAGCGGGTG
GCTCAAAAGA TTCAGCAGGC CCTTTTCTTG ACCAACATTC CCTATCCGGG CTCGCCGCTT
TCGGACAGAA TCACGGTAAG TCTCGGCATC TCGACATTCA GTCCGCAAAC CGACCTGCAC
ATCGATTCGG GACTCTTTTC AGCGGATCAG GCCCTCTACC AGGCCAAACG CAACGGACGG
AACTGTTTCT TCTACAAGGA CCATTGTCTG GCCCTAACGC CCCTGCGGCA ATGA
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| Protein sequence | MRTLIFILTL LLIPQPARAI PDIPLDVSKL DISFERGSHN SVIASAQDSQ GYIWLASIRG
LHVYDGRAFR PVLNEVLQGN NIRDIRIDAN DVLWVGTNSG VLAYPLATKT PRWYQMAKTP
AGFPATSANI IYQDQKGSLW AGTGNGGLHR YEPSFDKFER IDIIPPDPDT PWTVFDIAEN
AQRDMWLGTG QGVLRLTGTK GLATAIPLST GESYSAKKIT FDGAGNLWVG VAGKGLWILP
AQASQNELVA VDELKTARIL DLYTDSNGDV WIATAQGLFR YGFRQGSIFH HPFRIPGSQG
KTPRSIASFM ETKAGTLWIG TYNHGVLHRP PYPGAKLLEL RIKGQSEPVQ NADIICATSP
DSRVYVGLKQ GGVYRSAPLD VNQISLSNSI EIEPFLDAPR VNALVWSTDN SLLCGAKNAL
LRVTPNGEAE HKQLVFNDPD PSLSTHSVRH IALMDDGRIW VSNTKELYSW KPGDTDVRKE
LTFPPQAGGA SVMRSGAELW VAYGSTLHKI DPRSGHQRMY ALPEPANTEE AMSVKSLLMT
RSEELIVGTT KELLRYNLRS GTATPVHTIG NEHIPNVLSL WADKDGGTWM HTQTKIYHLP
PGSNQAREMA IGARHPASSI TASPAVLDKM LVYGHSDGLL LVDPQQLFSR PPTLPKISEI
RIYERKVPAT PLGRMPKALE LDHLQNFLSF SFSMPEISAL DAPRFVYKLE GVDSAWTDAG
TQSSVSYAHL QPGRYVFHLK DGFDGPVTES VSITIHPPWW LTVWAKTSYA LFLALTFLIS
SLLLARLQTA RIRKDMLENL VMQDPLTGVP NRRKFQEVLA AEKSRCKRSN HQISVLMIDI
DYFKGFNDRF GHQAGDLALR SVAQTLNATL KRPEDFVGRY GGEEFVVVLP STNRSGAERV
AQKIQQALFL TNIPYPGSPL SDRITVSLGI STFSPQTDLH IDSGLFSADQ ALYQAKRNGR
NCFFYKDHCL ALTPLRQ
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