| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2221 |
|---|
| Symbol | |
|---|
| ID | 8377895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2556112 |
|---|
| End bp | 2557581 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645001442 |
|---|
| Product | polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
|---|
| Protein accession | YP_003158719 |
|---|
| Protein GI | 256829991 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.120089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATG AACTGTATCA GCAATTTGAA AGGTATGCGC GGATCTTGCT GCAACGCAAG
CGCGTTGTGG TCGTCGTGGC TCTGCTGGTC ATGACCCTGG GCGTTATAAC CAGTTATGTC
CTGCCCAGGA AATACGAGGC GCAGTCCACG GTTTTCATCG AACAGAGCGT CATCAGCGAA
TTGGTCAAGG GCATTGCCAC CACTCCGTCC ATGGAGGCCA AGATCAAGGT TTTGACCGTG
GCCATGCTCA GTCGGGAAAC GCTCTTCAAG GTGATGCGCA TTCTGGATAA GGATGTCGAG
TTTGCTTCGG ATATGGATCG GGAAGCATAC ATCAAGGATT TGCGGGAGCG GATTTCCATC
AGGCTGGACG AAAAACGGGG GATCTTCTTC ATCTCCTTTC AGGACAGCGA CCCGCGTTAT
GCCCGTGATT TCGTCAACAC CATCACTCAA GTCTACATCG AGTCGAATAC GGCCTCCAAG
CGGGACGAAT CCCTGGAAGC GACCCGCTTT TTATCCGAGC AGATAGAGAG CTTCAAGAAG
CGCCTCGACG CGGTGGAGGA TGAGATCAAT CAGTACAGGG CCGAGCATGG CCTCCAGCTG
GCGACGGACG AGACCACAAT CCGTTTCGAG ATCGCCGATG CCGAGAGAAA GCTGGAGGCC
ATTCGGGCGC GCAAGCTTGA GCTTGAGACC AAGTTGCAGC TCATGCCCTC CGGAGGGGGC
CGGTCCGCGC ATCTGGCCGA TATGGAGCGC CAATTGGCGA CGCTTTTGAC GGCCTATACG
GATCAGCATC CAAAGGTCGT GCGGCTGCAG GGGCAGATCA GGGCCGTGAA AAGCAGTCCG
TCGGGCGGCA TGACCGGGAA CTCGGGAGCA GCCGCCAAGA CACTGGTTCA GGCCGAGATA
GAGGCCGCCA CGCTTCAGGA GAAGGCCCAG CTTGCGACCA TCGAGGAAAA GACGGAGCTT
CTGCGCCGGA TTCCCACGCT CCGCACGGGG CTGAACGAAC TCTTGCGCAA GAAGGATAAC
GAGACCCTGA TCTACAGTCA GCTCGTGACC CGCTACGGCC AGTCGGAAGT TTCCAAACAA
ATGGAGATGG AAAACAAGTC CATGAACTTT CGGGTCGTGG ATCCGGCTGT CATGCCCGAC
ACCACTGTCA GTCCCAAGCG CGTGCCGATC ATGCTTTTGT CGGCCCTGGC CGGAATCGGG
ATAGGCATGG CCGTCATCAT GGTGCCGTAC CTCATGCGCG GGTCGGTGGA GAGCCTGGCC
GACCTGCGGT CTCTCAACCA GCGGGTGCTG GCCGTTCTGC CTGCGATTTC CAAGCCAAAG
GAGGAGAGGC AGCGCGTGAG GGGGGACCGT ATTTTTATGT CCGGAGCGGC GCTTTATTTC
CTCATGCTGG TGACCATCGG CGTCATGGAG GCCCTGGGCA ACTCACCCCT CGATGTGCTG
TTTGAAAGGG CGCTCGGCCC TTGGCTGTAG
|
|---|
| Protein sequence | MNHELYQQFE RYARILLQRK RVVVVVALLV MTLGVITSYV LPRKYEAQST VFIEQSVISE
LVKGIATTPS MEAKIKVLTV AMLSRETLFK VMRILDKDVE FASDMDREAY IKDLRERISI
RLDEKRGIFF ISFQDSDPRY ARDFVNTITQ VYIESNTASK RDESLEATRF LSEQIESFKK
RLDAVEDEIN QYRAEHGLQL ATDETTIRFE IADAERKLEA IRARKLELET KLQLMPSGGG
RSAHLADMER QLATLLTAYT DQHPKVVRLQ GQIRAVKSSP SGGMTGNSGA AAKTLVQAEI
EAATLQEKAQ LATIEEKTEL LRRIPTLRTG LNELLRKKDN ETLIYSQLVT RYGQSEVSKQ
MEMENKSMNF RVVDPAVMPD TTVSPKRVPI MLLSALAGIG IGMAVIMVPY LMRGSVESLA
DLRSLNQRVL AVLPAISKPK EERQRVRGDR IFMSGAALYF LMLVTIGVME ALGNSPLDVL
FERALGPWL
|
|---|
| |