Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_2194 |
Symbol | |
ID | 8377868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2521580 |
End bp | 2523409 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 645001415 |
Product | histidine kinase |
Protein accession | YP_003158692 |
Protein GI | 256829964 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGTTG CTATGCCGAC GTATTGCGAA ACAGTTACGA TCTCTGGTTT TTACATGTTT GATATAAAGA AGAATTATAA TGAGAGTGAT GGCATGACAA AACGGTATGC GGAGCAAGAT CACCTCTTTG AGTTGAACAG AGGGGGGACG TTGGGCCGGG AGGAGTGTTT CTCCCACCGG CTTCACGGGC TTGACGATTC CAATGATGTT CGGGTGCTGA ATGAACTCAA AGCCAAGCAG GGCGCGTTGT TGATACAGAA CGAAGAACTG CGCAGGGCTT TGGACAACTC GGAAAAGAAA TTAGCGATCT ATTCGGATTT TTATGATTTT TCTCCCTATG GCTTGGTCTG CCTGGACGAA CAGGGGCGCG TTTGGGAGGC AAACCCTTGG ACAATCGGTC AATTGGGCGT GGAAAGAGAC GCGCTGCTTG GCTCGTCTTT TGGGCAGCGT GTCGCTTCTC AGGACATGGA AAAATTCAGG GTGCATCTTG ATCTTGTTTT CAAAACAGGA GAGCGGCAGA GTTGCGAGTT GATGCTCAAG CGGAAGAACA TGCAGGATCT CCGGGTCAAA ATAGACAGCA TCAAATCTTC AAATAGTGGC TGTGCTGATT TGTGTATGTC TGCTTTGGCA GATATTACTG GCATGTATAA TCCAAAACTC TTAAATAACT TTTCTTCTTC TGATGTGGAT GAAATTTTTC ATTCAAATAC AGATTTTACT GTAGAAAGTG AAGATAAATT TCAAATATTA TTACAGCAGT TTCACGCGAT ATTAAGTGAT ATCAGTGGTA CTGTAATTAT TGTTTCGCCA GATATGAAGG TTTTATGGTC GAACATAGTC AACGATTTTG GAATTAATTC GAATATATCA GAAAGTGTTT TAAAGTATTG CAATGATTTT GTGAGTAATT GTTCAGTGCT CTATGAAAAA TCTGTTATCA TTGATTGCTT TAATACCGGA GAAAAAAAAT CGTGCATCGT TACGCATGGC GAATCTGTTT TGGATATACG GGCCTTTCCC GTCAAGGAAA GTGGAAGTGT GAGCAGTGTG CTGCTGCTGG TGTGCGATGT CACGGGAAAA ATGGCGATTC AGGAGGATGC GCAGTATGCC TGCCATCTTT TGTCACTCGG GGAACTGGCT GCGAGCGTCG CGCATGAGAT AAACAATCCG GTCAACGGCA TCATCAATTA CGGGCAAATA CTGGTCAACG AATGCGGCGC AGAGAGCATG GAGCGTGATC TGGGAGTGCG CATCCTCAAA GAGGGCGAGC GCATCGGCCG CCTCGTCAAG TCCCTCCTTT CCTACGCGCA CGAAAGGCGA AAAGAGAAAA GAGCGACACA GGTCGCGACT ATTCTTGAGG AAACCCTGGC CCTGACCCAG GCCCAGATTC GCAAGGACGG CATTCAGCTT GTTCTCGACT TCCCTGAAAG TCTCCCCAAG GTCACGGCAA ATCTGCAGCA GGTTCAGCAG GGGTTCATAA ACATCATCAG CAATGCGCGC TATGCATTGA ATGAAAAGTA TCCGGGGTGG CATAAGAACA AATGTCTCGC GATCTCCGGC GAATCCGTCT TGGTCGATGG CTGTCCTTTT GTACGGGTGG CGTTTCTGGA TCAGGGGGGA GGGATATCGG TCGAAAAGCT CTCGTTTTTG ACCAAGCCTT TTTTCTCCAC CAAACCTTTT GGCAAGGGGA CCGGGCTGGG GCTGAGCATT ACGCAGAAGA TCATCGATGA TCACGGCGGG CATCTGCGGT TTGAGAGTGA AGAGGGGGAG TTTACCCGCG TTATAATTGA TTTGCCGGTT CATCAAAAAG ATGAAGGAAC ATGTAAATGA
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Protein sequence | MIVAMPTYCE TVTISGFYMF DIKKNYNESD GMTKRYAEQD HLFELNRGGT LGREECFSHR LHGLDDSNDV RVLNELKAKQ GALLIQNEEL RRALDNSEKK LAIYSDFYDF SPYGLVCLDE QGRVWEANPW TIGQLGVERD ALLGSSFGQR VASQDMEKFR VHLDLVFKTG ERQSCELMLK RKNMQDLRVK IDSIKSSNSG CADLCMSALA DITGMYNPKL LNNFSSSDVD EIFHSNTDFT VESEDKFQIL LQQFHAILSD ISGTVIIVSP DMKVLWSNIV NDFGINSNIS ESVLKYCNDF VSNCSVLYEK SVIIDCFNTG EKKSCIVTHG ESVLDIRAFP VKESGSVSSV LLLVCDVTGK MAIQEDAQYA CHLLSLGELA ASVAHEINNP VNGIINYGQI LVNECGAESM ERDLGVRILK EGERIGRLVK SLLSYAHERR KEKRATQVAT ILEETLALTQ AQIRKDGIQL VLDFPESLPK VTANLQQVQQ GFINIISNAR YALNEKYPGW HKNKCLAISG ESVLVDGCPF VRVAFLDQGG GISVEKLSFL TKPFFSTKPF GKGTGLGLSI TQKIIDDHGG HLRFESEEGE FTRVIIDLPV HQKDEGTCK
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