| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2104 |
|---|
| Symbol | |
|---|
| ID | 8377779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2412299 |
|---|
| End bp | 2412985 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645001328 |
|---|
| Product | cobalamin B12-binding domain protein |
|---|
| Protein accession | YP_003158605 |
|---|
| Protein GI | 256829877 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5012] Predicted cobalamin binding protein |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0454156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA AGAGTGGCGT CAATCTGGAA TCGCGCAGGG AAGCCTTGTA TTCATTGATG
CTTAACGCTG AGCGTGAAGA GGCTCTGGGA CTGTTGCTCG AACACGCGGG GGCCCACGGC
TTTCAGGCGG CGGTTAACGT TCTGCTCGAA CCTGTGCTGG AGCGGATAGG GGAAGCCTGG
CATCTGGAAA ATCTGTCCCT GGCCCAAGGC TATGTGGCCG GGAAGATCGC CGAGGACCTT
CTGGTCGCCG CTGCCGAATC CGGCGGGGAT CTGCCGCTGG ATGTCAAAGG GCCGGTGGTG
CTTGGCAATG TGGAGGATGA CTACCATTCG CTGGGGCGCA AGATGGTCGC GGTATTTTTG
CGCGCCGCCG GCTGGAAGGT CATTGATCTG GGCAACGACG TGACACCCCA GAATTTTATC
GCGGCGGCCC TGGAGCACGA TGCGAGGGTT GTCGGGGTCT CGGCCATGAT GCTGACCACG
GCCGAGAACA TCCGCGCCCT GCGGACCGAG ATCGATGCCC AGGGGCTTCG CGGCAAGGTT
CAACTGGCCG TGGGCGGGGC GGTCTTCAAG CTGCGGCCGG AACTGACGCT TGAGGTCGGC
GGCGACGGCA CGGCCTCCAG TGCCATCCAG GCCCCGGAGC TGTTTGACCG GCTTTGGGCC
AAAAGCCTTG AGACGGACGG GATATGA
|
|---|
| Protein sequence | MTEKSGVNLE SRREALYSLM LNAEREEALG LLLEHAGAHG FQAAVNVLLE PVLERIGEAW
HLENLSLAQG YVAGKIAEDL LVAAAESGGD LPLDVKGPVV LGNVEDDYHS LGRKMVAVFL
RAAGWKVIDL GNDVTPQNFI AAALEHDARV VGVSAMMLTT AENIRALRTE IDAQGLRGKV
QLAVGGAVFK LRPELTLEVG GDGTASSAIQ APELFDRLWA KSLETDGI
|
|---|
| |