Gene Dbac_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_2017 
Symbol 
ID8377692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp2319118 
End bp2320257 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content35% 
IMG OID645001242 
Productresponse regulator receiver modulated metal dependent phosphohydrolase 
Protein accessionYP_003158519 
Protein GI256829791 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.98115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTATA AATACAGTAT TGACGAATAC TCTGAATTTA ATATTAATTT GCAAGTACCG 
AATGATCAAA TTGATGAAGA GTTGAATGAA TGCAAAATTT TAATTGTCGA TGATTATGAA
ATTAACATAC TTGTATTGAT TGAGGCGCTA AGTTCTTATT CAAAAATTTC AGTATCGCAA
GATAGCAAGA TAGCGTTTGA TTCTTTATCT TACGCTTTGC CTGATATAAT ACTGCTTGAT
ATTTCCATGC CATATATGAA TGGCCTTGAT GTTTGTAAAT ATATAAAAAA AAATAAAGAT
ACTAATGATA TTCCTGTGAT TTTTATAACT TCAGAACGTG ATCCATTAAC TTTGAATAAA
GCTTTTGAGC TTGGTGCTGT TGATTATATA AAAAAACCAT TTGATATAAT TGAAGTTAAT
GCAAGGATAA AAACTCATTT AAAGCTCAAA ATCGCAGAAA GAAAATTGAA AGAATATAAT
ACGAGCCTTG AATTTAAGGT GGCAGAACGG ACCAAAAAGC TTGAAGAAAA AAATATCGAA
CTGAATGAAG TCAAGCGGGA AACAATTTTC AGATTATGCC TTGCTGCAGA ATTGCGTGAT
ACAGACACAG GGAATCACAT TAAACGAATC CAGGCATATA CAGAATTGAT CGCATTGAAG
TGTGGAATGT CTCAGGAAGA CGCTGCGCAA TTGGGTTTGG CGAGTTCAAT GCATGATCTT
GGAAAGATTG GTATTTCAGA TCATATTTTG CTTAAGCCCG GCAAGCTTAC ACCTGAAGAG
TTTGAAATCA TGAAGCAACA CACCGTGATT GGCGCAAGAG CTTTGGCAGA TGGTAAGTCT
GATTTGCTAC GGGTAGCGCA TATTGTTGCC TTGTCTCATC ACGAGCGTTG GGATGGAAAA
GGATACCCTC AAGGTTTGCG CGGTGCGAAT ATTCCCATTG AAGCACGGAT TGTCGGACTC
GTTGACGTTT TTGATGCATT GCTTTCTCGA AGGTCCTATA AGGATTCTTT TTCAGTAGAC
GATGCGGTAT CAATCATTGT AAGTGAGAAA GATAAGCATT TTGATTCTAA ACTTGTAGAT
GTATTTGTTG CGTCTTTGAA TGAAATATTA ATTATCAAAG ATTTATTTTG TTATGAATAA
 
Protein sequence
MQYKYSIDEY SEFNINLQVP NDQIDEELNE CKILIVDDYE INILVLIEAL SSYSKISVSQ 
DSKIAFDSLS YALPDIILLD ISMPYMNGLD VCKYIKKNKD TNDIPVIFIT SERDPLTLNK
AFELGAVDYI KKPFDIIEVN ARIKTHLKLK IAERKLKEYN TSLEFKVAER TKKLEEKNIE
LNEVKRETIF RLCLAAELRD TDTGNHIKRI QAYTELIALK CGMSQEDAAQ LGLASSMHDL
GKIGISDHIL LKPGKLTPEE FEIMKQHTVI GARALADGKS DLLRVAHIVA LSHHERWDGK
GYPQGLRGAN IPIEARIVGL VDVFDALLSR RSYKDSFSVD DAVSIIVSEK DKHFDSKLVD
VFVASLNEIL IIKDLFCYE