| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_2015 |
|---|
| Symbol | |
|---|
| ID | 8377690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2316842 |
|---|
| End bp | 2317501 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 645001240 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003158517 |
|---|
| Protein GI | 256829789 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA AGATTCTTTT GGTTGAAGAC GATCTTTTAT TGCGCAAAGG GCTGAAGACA
ATGATCGAGA TGCGGGGTGG GTTCAGCATT GATGCAGATA CCGGCAGCGG CAAGGAGGCG
GTAAGGCTTT TTGGCATGTT GCATCCGGAT ATTGTCCTGC TTGACCTGAT GCTTCCTGAC
ATTTCCGGCA CGGAGGTTTT GCGGCAGTTG AAACAGGTGG CGCCGAATGT CCCTGTTATT
CTGCTGACCA TCTGCGAGGA TAACGAACTG CTGTTTCAGG CCCTTGCCCT CGGCGCCAAC
GCCTACGTGC TCAAGGGTTC CGGCCCGGAA GAATTGTTTT TAGGGATTCA TTATTCCATG
AAAAACGAGA TGTTTATAAG TCCAAAGTTG GCCAAGATAA TTGTTGAGGA TTATCTTTTG
GTCAACCACC ATCGAAATTC TCTTCCCCCT TTGCATAACC TTACGTCACG GGAAAAAGAA
ATTGTTAAAC TCATTATCGA TGGGAATAAA AGCAGAGAGA TCGCTGAAAT TCTTTTTATA
AGCATTAAGA CGGTGAACAA GCACAGGTCA AATATTCTCG TAAAACTCGG AATCCACAAC
CTGTCAGAGC TTCGTCAAGG AAAGCCCTAT GTCTTGGAGA CAATAAGCGG TATAAATTGA
|
|---|
| Protein sequence | MKKKILLVED DLLLRKGLKT MIEMRGGFSI DADTGSGKEA VRLFGMLHPD IVLLDLMLPD
ISGTEVLRQL KQVAPNVPVI LLTICEDNEL LFQALALGAN AYVLKGSGPE ELFLGIHYSM
KNEMFISPKL AKIIVEDYLL VNHHRNSLPP LHNLTSREKE IVKLIIDGNK SREIAEILFI
SIKTVNKHRS NILVKLGIHN LSELRQGKPY VLETISGIN
|
|---|
| |