Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1979 |
Symbol | |
ID | 8377653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 2272121 |
End bp | 2272783 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645001205 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003158483 |
Protein GI | 256829755 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.053401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACTA AAAATTTGCT AAAAAGAAGA GTTTTGCGAG ACGATGTTGC GGAATACTTG ATGGAATCCA TTCTCAAAGG GGATCTCAAC CCTGGAGACA AAATAATCGA ATCAAAATTG GCAAGAGAAC TGTCCATCAG CCAAGGCGCA GTACGAGAGG CCATCCGCGA CCTCATCGCT CAAGGCGTAT TGGAGACGGA ACCCTACAAG GGAACGCGCA TACGGACCCT CACGAAAGAA CAGCTCAATG ATTACTATGA CGTACGCACG GAAATTGAAG CGCTGGCTGT GAGATGGAGC ATCATCAAAC ATGAATCTAA ATATCTTGAT CTCGCCTTTT TAAAAAGCTG CGTGGACAAT ATGAAAATCT GCGTCGATAA CAATGACTCG AAAAACATGC GAAAACACGA CATGGCTTTT CATTTGGCCA TAGTCCAAGC AGCGCATAGC GAATCACTTG AAAAAGCGTG GAACTCACTG GGAAATTACT ACTGGACCTA CATTGCGGTT TACTACGACC ATGCCGCTTC ATTGCTGCAA GCTCAAGTCG TAAAACACCA AACCATGTAC GAAGCCATCG CAGCAGCCGA CATCAACGCC TACGCGAACT GTGTACGCGG CCACTACTTC GATACTGACC AACTCTTTCC AGAAAAGAAA TAA
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Protein sequence | METKNLLKRR VLRDDVAEYL MESILKGDLN PGDKIIESKL ARELSISQGA VREAIRDLIA QGVLETEPYK GTRIRTLTKE QLNDYYDVRT EIEALAVRWS IIKHESKYLD LAFLKSCVDN MKICVDNNDS KNMRKHDMAF HLAIVQAAHS ESLEKAWNSL GNYYWTYIAV YYDHAASLLQ AQVVKHQTMY EAIAAADINA YANCVRGHYF DTDQLFPEKK
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