Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1925 |
Symbol | |
ID | 8377597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | - |
Start bp | 2217473 |
End bp | 2218663 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645001152 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003158431 |
Protein GI | 256829703 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.588537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGTC TCATGTCCCG CAAGAAATTT CTGATGCTGG TCATCCTTGG TCTCTTGGCA GGGGCCTTCC TGTATGTGGC GCTGCGTTCC GGGCCGTTGG CTCCCGTTGC GGTGGTCGTG TTCGAGGTCA GGGAGATGCC GGTGGAGCCG TCGCTTTTCG GCATCGGCAC GGTGGAGGCA CGGTACACGC AGAACATTGG ACCGATAGGC TCCGGCCGGG TTCTTGAGAT TTTGGTGGAT GTGGGGGACC GGGTCGAACC GGGGCAGGTC ATTGGTGAAA TGGACCCCGT GGACCTTGAT GACAGGCTCG ACGCCCAGGA TGCCGCCATG ATGCGCGCCG CTGCGACGGT GCGGGCCGCC GAAGCCCAGG TTTCGGAACT GCGGGCGAAA ACAACCTACG CCGAGTCCCA GGCCCGCCGC TTTGACACCC TGGTGCAGAG CGGAGCGGTG AGCAGGGATA CCTTCGAGGC AAGCAGACAG GAGTTGCAGG TCGCGCGGAG CGGGCTTGAG GCCGCCCTGG CCACCGTGGC TTCGGCCAAG CACGAATACG ACCGCCTCAC GTCCGAAGGG GCCGGCATAT CTCGCCAGCG GGAGACCGTC AGGCTGGTTT CGCCTGTTGC CGGGCTGGTC ACCAGGCGGC TGATCGAGCC CGGCACGACT GCCGTGGCCG GGCAGGCCGT GGTGGAGATC ATCGACCCGG ATCATATCTG GGTCAATGCC CGCTTCGATC AGCTCCGGGC TTCCGGGCTT GCGGCCGGCT TGCCGGCGCG AGTCGTGCTG CGTTCCCGTT CGTCGGAATC CCTTCGCGCG CACGTGTACC GTGTCGAGCC GGTTGCGGAC GCCGTGACTG AGGAACTGCT GGCAAAGGTG ACCTTCGAAT CCCTGCCAGA CCCTCTGCCT GCCATGGGCG AACTGGCCGA GGTGACCGTG GATCTGCCTG CCCTGCCGCC TGCTCCGGCC ATTCCCGGCA GCAGCGTGCT GCGGGACAAA GACACGCTTG GAGTCTGGGT TGTTGAAGAC GGGAACATCG AATTCGTTCC CGTCGAACTT GGCCAGGGAG ATCTGGACGG GCTGGTGCAG GTCCGCAAGG GGCTGAGTGC GGGACAGACC GTCGTCTCGC ACAGCGCGTC CACGCTGACG GCCAGAAGCG GCATCACGAT TGTGGACCAT CTTCCGGGGG TGCCCAAATG A
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Protein sequence | MMSLMSRKKF LMLVILGLLA GAFLYVALRS GPLAPVAVVV FEVREMPVEP SLFGIGTVEA RYTQNIGPIG SGRVLEILVD VGDRVEPGQV IGEMDPVDLD DRLDAQDAAM MRAAATVRAA EAQVSELRAK TTYAESQARR FDTLVQSGAV SRDTFEASRQ ELQVARSGLE AALATVASAK HEYDRLTSEG AGISRQRETV RLVSPVAGLV TRRLIEPGTT AVAGQAVVEI IDPDHIWVNA RFDQLRASGL AAGLPARVVL RSRSSESLRA HVYRVEPVAD AVTEELLAKV TFESLPDPLP AMGELAEVTV DLPALPPAPA IPGSSVLRDK DTLGVWVVED GNIEFVPVEL GQGDLDGLVQ VRKGLSAGQT VVSHSASTLT ARSGITIVDH LPGVPK
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