| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1788 |
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| Symbol | |
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| ID | 8377460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 2036251 |
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| End bp | 2038086 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645001016 |
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| Product | signal peptide peptidase SppA, 67K type |
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| Protein accession | YP_003158295 |
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| Protein GI | 256829567 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.969097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAATAC TCGACCGCAT AAAATCAATC CTGAGCATCC TGTGGAAGGT TTTGAGCACC
ACCAGAGTCG TCGTTGCCAA CATCTTCTTC CTGCTGGTGG TCATCATACT CTTCGGAGTC
TTTTTTACCG ACACGGAAGA GACGCTAAGG CAGAACTCGG TGCTGGTCGT CAATCCGGCC
GGAGCCCTGG TCGAGCAGCG CAACGCGCCG AAACCGGCCG AAGCCCTGCT CAGGAAAATG
GGCCGGGAGA CGGCCAAGGC CGATGAGACC AAAACCCAGG ACATCATCGA CGCCATCCGC
AAAGCCGCCA CGGACTCCAA TATCCTGGCC ATGGTCATCG ACCCCCGGGA CCTGCAGGGC
TGCGACACGA CCAAACTTCT CGACATCGGC AAGGCCATCC TGGACTTCAA GGAAACGGGC
AAACCCGTGC TGGCCCACTC CATGGTCTAC ACCCAGGGAC AATACCTGCT GGCGTCCTAT
GCCGACACGA TCTCGGTCAA TCCGCTGGGC GGGGTGATGA TCACGGGATT CGGCATGTAC
CAGACCTATT TCAAGGGCCT GCTGGACAAG ACGCGCATCA ATTTTCACGT CTTCCGCGTC
GGCGACTACA AGACCGCCGT GGAACCTTTC GTGCGCGAAT CCATGTCCGA AGAAGCAAAA
GAGGCCGGAC GGGAATGGCT GGGCGGGCTC TGGCAGGCCT ATCTTGATGA AGCTTCCAAA
AACCGGGGCG TCTCCCCTTC CGACATAACG TCCTACGTGG AGAACATCGA CACCAGACTT
GCTGCGGTGG GCGGCGATGC CGCACGCCTG GCCGTAACTG CGAAACTGGT TGACGAAATC
AAGACATCCA CCCAGTTCGA CCAGCTGCTG GCCGGCAAGA CCGGAAAGAA AGTCGAAGAC
CTGAACCGGG TCGACTTTCA GGACTATCTC GCCATGTCGC CCTCCGGGCA GACGGCGAGC
AAGGAAGTCA TCGGCATCAT CAGAGCCCGG GGGGCCATCC TGCCCGGCAA GCAGCCGGAA
AACATGACCG GCAGCGAATC CATCGCCGAA CTTTTCCAGA TGGCGCGGCA GGATCCGACG
GTTCTGGCCG TGGTGCTGCG CCTGGACAGC CCCGGCGGAA GCGCGGCCGC GTCCGAGGAG
ATTCATCACG AGATCGCCCG TACCCAGGAA GCGGGCAAGC CCGTGGTGGT CTCCATGGGC
AGCGTGGCCG CCTCGGGAGC GTACTGGATC GCGGCCGGGG CCAACCGCAT CGTGGCCGCG
CCGACCACTC TGACCGGCTC CATCGGCATT TTCGCGGCCT TCCCCACTTT TGAAGACACG
GCCATGAACC TGGGCATCAC CACCGACGGT ATCGGCACGA CCCCTCTTGC CGATCTCGGC
AACCCCCTGC GCCCCCTGTC CGCCCAAAGC GAGAGGGCCA TAGGGCACTT GCTGCGCTTC
GGCTACGACC TCTTCATCGA CCGCGTGGCC AGCGGCCGCA GGCTGCCTGC GGCCGACGTC
GAAAACTCGG CCCAGGGCAG GGTTTTCCTG GGACAGGAGG CTCTCAGCCG CAAACTGGTC
GACCAACTCG GCGATCTGGA CGACGCCTTG AAGACCGCCG CCAGCCTGGC GGGATTGACC
GTGGTCAACA GCAAGGAGTT GCGCCGCGCC CCATCGTCCC ACGAAAAACT GCTGCAGACC
TTTTTCTCGA CGGCCCAGGC CCTCTTCACG CAACAGTCCC CGGCCATCTC CAAAATGCTG
AACATGGTCG AAACCCAGGC CCGGATTTTC GAAAGTTTCG CCGATCCGAA TCATATCTAT
GCGCGCAGCC TGGAGTGCGA AGGGTCGCTG TTCTGA
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| Protein sequence | MEILDRIKSI LSILWKVLST TRVVVANIFF LLVVIILFGV FFTDTEETLR QNSVLVVNPA
GALVEQRNAP KPAEALLRKM GRETAKADET KTQDIIDAIR KAATDSNILA MVIDPRDLQG
CDTTKLLDIG KAILDFKETG KPVLAHSMVY TQGQYLLASY ADTISVNPLG GVMITGFGMY
QTYFKGLLDK TRINFHVFRV GDYKTAVEPF VRESMSEEAK EAGREWLGGL WQAYLDEASK
NRGVSPSDIT SYVENIDTRL AAVGGDAARL AVTAKLVDEI KTSTQFDQLL AGKTGKKVED
LNRVDFQDYL AMSPSGQTAS KEVIGIIRAR GAILPGKQPE NMTGSESIAE LFQMARQDPT
VLAVVLRLDS PGGSAAASEE IHHEIARTQE AGKPVVVSMG SVAASGAYWI AAGANRIVAA
PTTLTGSIGI FAAFPTFEDT AMNLGITTDG IGTTPLADLG NPLRPLSAQS ERAIGHLLRF
GYDLFIDRVA SGRRLPAADV ENSAQGRVFL GQEALSRKLV DQLGDLDDAL KTAASLAGLT
VVNSKELRRA PSSHEKLLQT FFSTAQALFT QQSPAISKML NMVETQARIF ESFADPNHIY
ARSLECEGSL F
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