| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1759 |
|---|
| Symbol | |
|---|
| ID | 8377431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 2001915 |
|---|
| End bp | 2003120 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 645000987 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_003158266 |
|---|
| Protein GI | 256829538 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1459] Type II secretory pathway, component PulF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCT TTATCTATAA GGCAAAAACA CGCGGCGGTA GATCGGTCAA AGGGGATTTG
GACGCTCCAA GCCTTGAATT TGCCGAAAAT ATCCTGCGAC GCAAAGGATA TGGCAATGTC
CGGGTCAAGC CGAAACCCAA GGACATTCTG GAAGGCACCT TTCTTGAGGG CGGTGTGTCC
GATCGCGACA TGGTCGTCTT CAGCCGGCAG TTCGCCACCA TGATCAACGC AGGCGTGCCC
ATCCTGCAGG CCTTGCAGAT CATGTGCGAG CAGACCGAGA ACCCCAAGCT GCGCCGCAAG
CTCTATGCGG TCAGAAACGA CATCGAGGGC GGCAGCTCCC TGTACGAGGC CCTCAAAAAA
CATCCCGACA TTTTTGACGC GCTCTATTCC AACATGGTCA ACGCCGGTGA GACAGGCGGT
ATTCTGGACC AGGTCCTCAT ACGTCTGGCC GAATACATCG AGAAGGCCGC CAAGCTCAAA
GCCAAGATCA AGGGCGCCAT GATCTACCCG GGCGTGGTCG TGACCGTGGC CGTGGCGGTC
ATCGCGGTCA TCCTCATCTT CGTCATCCCG ACTTTTGAGC AGATGTTCAC CGAATCCGGC
GGCGCGCTTC CCCTGCCGAC CCAGATAGTC ATCAACATGA GTAATTTCGT CATCAACAAT
TTCATGTTGC TGGTGGGCGG CATCATCGCT TTTATTGTCG CCTTCAAGTT TTTCTACAAA
TGGGAGAAGG GGAAGATCCT TGTCGATCGC TGGGTTCTTT TTCTGCCCGT CTTCGGCCCC
CTGCTGCGCA AGGCCGCCGT GGCCAAGTTC AGCCGGACGC TGGCGACCAT GGTTTCAAGC
GGCGTGCCGA TATTGAACGC GCTGGATATC GTCTCGCGCA CATCGGGCAA CAAGACCGTT
GAAAAGGGCG TGCTCGAAGC CAAGAAATCC ATCGCCGAAG GCCAGAGCCT GGCCGAACCG
CTTGATGACA CCGGGGTCTT CCCGCCCATG GTCATCCACA TGATCGCCAT CGGCGAAACC
ACGGGCGCGC TCGATTCCAT GCTGACAAAA ATCGCGGATT TCTATGATGA CGAGGTCGAC
GTGGCCGTTG ACGCCCTGAC CTCTCTCATC GAGCCGATCA TGATCGTTTT TCTGGGCGTG
GTCGTTGGTG GACTGGTCAT CAGCATGTAC CTGCCCATCT TCTCCATCGC CGACACCGTA
GCGTAA
|
|---|
| Protein sequence | MPVFIYKAKT RGGRSVKGDL DAPSLEFAEN ILRRKGYGNV RVKPKPKDIL EGTFLEGGVS
DRDMVVFSRQ FATMINAGVP ILQALQIMCE QTENPKLRRK LYAVRNDIEG GSSLYEALKK
HPDIFDALYS NMVNAGETGG ILDQVLIRLA EYIEKAAKLK AKIKGAMIYP GVVVTVAVAV
IAVILIFVIP TFEQMFTESG GALPLPTQIV INMSNFVINN FMLLVGGIIA FIVAFKFFYK
WEKGKILVDR WVLFLPVFGP LLRKAAVAKF SRTLATMVSS GVPILNALDI VSRTSGNKTV
EKGVLEAKKS IAEGQSLAEP LDDTGVFPPM VIHMIAIGET TGALDSMLTK IADFYDDEVD
VAVDALTSLI EPIMIVFLGV VVGGLVISMY LPIFSIADTV A
|
|---|
| |