| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1742 |
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| Symbol | |
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| ID | 8377414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | - |
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| Start bp | 1984004 |
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| End bp | 1985266 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645000970 |
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| Product | 3-isopropylmalate dehydratase large subunit |
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| Protein accession | YP_003158249 |
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| Protein GI | 256829521 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR01343] homoaconitate hydratase family protein
[TIGR02083] 3-isopropylmalate dehydratase, large subunit
[TIGR02086] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.482523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAGA CTTTAGCACA GAAAATATTG CAGAGGCATA CGGACCAGCC CATCACCGCG
GACGGACAGA TTGTCCAGTG CCGCGTTTCC ATGGTGCTGG CCAACGATAT AACCGCGCCG
CTCGCCATCA AGTCCATCCG GGGCATGGGC GTGAAGCAGG TCTTCGACAA GGACAAGGTG
GCCCTTGTCT GCGACCATTT CACCCCCAAC AAGGACATCG ACTCGGCCGA GCAGGTCAAG
GTCGTGCGCG ACTTTGCCCG CGAGATGGAC ATCACCCACT ATTACGAAGG CGGGAATGTC
GGTGTCGAGC ACGCCATCCT GCCCGAATAC GGGTTGGTCG GACCCGGCGA CATCGTGGTC
GGCGCGGACA GCCACACCTG CACCTACGGG GGGCTCGGCG CCTTCGCCAC GGGCCTCGGC
AGTACGGACA TCGCCGCAGC CATGGCCCTG GGCGAGACCT GGTTCAAGGT GCCGGAGACC
ATCCGTGTCA ACTTCACGGG CAAGCTGCCC GAACATGTCG GCGGCAAGGA TCTTGTTCTT
TTCACCATCG GTCAGACCGG CGTGGCCGGG GCCCTGTACA AGGCCCTGGA GTTCGGTGGC
GAGATCATTG AGGGGCTCTC CGTGGAAGCG CGCATGACCA TGGCCAACAT GGCCATCGAG
GCCGGGGGCA AGGCCGGGCT TTTCGCTGCC GACGAAAAGA CCCTGGCCTA TTGCCAGGCT
CACGGCCGCA TGGGCGACAG CCCCATCGCC GCCGACGAGG GCGCGCATTA CTGGAAGGAG
ATGACCTTCG ACGTGTCCTC CTTCTCGCCT CAGATCGCCT GTCCGCACCT GCCGGACAAT
GTGCGGCCGG TGGAAGAGGT TTCCGACGTG CGCGTGGATC AGGTCGTGCT TGGCTCCTGC
ACCAACGGTC GCATCAGCGA CCTGCGCGAG GCCGCCAAAA TCATCAAGGG CCGCAAGGTG
GCCAAAGGCG TGCGCTTCAT CGTCATCCCC GCCTCGCCCG GCGCGTATTC GATGGCTCTG
GACGAAGGTT TGCTGCGCAT TTTTCTCGAC GCGGGGGCGA TCATCAGCCC GCCCACCTGC
GGACCGTGCC TGGGCGGACA CATGGGCATT CTGGCCGGCG GCGAGCGCTG CCTAGCCACG
ACCAACCGCA ATTTCAAGGG ACGCATGGGC AGCCTGCAGT CCGAAGTCTA CCTGGCCAAC
CCTGCGGTGG CGGCGGCCAC GGCCGTGACC GGGTTCATCA CCCATCCGGC CAAACTTGGT
TAA
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| Protein sequence | MRQTLAQKIL QRHTDQPITA DGQIVQCRVS MVLANDITAP LAIKSIRGMG VKQVFDKDKV
ALVCDHFTPN KDIDSAEQVK VVRDFAREMD ITHYYEGGNV GVEHAILPEY GLVGPGDIVV
GADSHTCTYG GLGAFATGLG STDIAAAMAL GETWFKVPET IRVNFTGKLP EHVGGKDLVL
FTIGQTGVAG ALYKALEFGG EIIEGLSVEA RMTMANMAIE AGGKAGLFAA DEKTLAYCQA
HGRMGDSPIA ADEGAHYWKE MTFDVSSFSP QIACPHLPDN VRPVEEVSDV RVDQVVLGSC
TNGRISDLRE AAKIIKGRKV AKGVRFIVIP ASPGAYSMAL DEGLLRIFLD AGAIISPPTC
GPCLGGHMGI LAGGERCLAT TNRNFKGRMG SLQSEVYLAN PAVAAATAVT GFITHPAKLG
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