| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1721 |
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| Symbol | |
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| ID | 8377393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1960446 |
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| End bp | 1961897 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645000949 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003158228 |
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| Protein GI | 256829500 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.176219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCC TTACCCGCCC CTGCCTGGGC CTCGCTCTCA GCTCCGAGTT GGCATCCCAG
CTGGAGGGCC ACCTGCCACG AACACGCGTC CTCGAAAATC GTTCGCTCAG TTCGGCACAG
GAATTCATGA GCGCGAGAAC CCAGGGTGGG CTTGTCTTCA TTGCCGTTTC CACATGGAAG
GAACTTGCCC CGGACGACAG GGAGCGATTG ATTGCGCACA AGTCCTGGCA GTTCATGCTC
ATCGCCGATC AGCATGACCC GGATGCTCTT GAATACATGT CCTCCGGCAC GTTCCTGACC
CTCATGACCT GCCCCCTTGA TAGGGCAAAA ATTTCCCGCG CCCTGCAGCA GGCGGAAGAA
GTGTCCAACA TGTATGACGA CATCTTCCAC ATGGCACGCG AAATCAGCCT CGAACGGGAG
CTTCTGACGC GTAAGAATGA GCAGCTTGCC TTTCTCAACC AGCTCCTGAC CAGGGCCAGT
CAAACCCTTG ACCCGGCGGT CATCCTTGCC AATTGCTCCG AAGACTTCGC CATGCTGCTT
GACGTCGGAA ACGTGCTCGG CGTCTTCTGG GCCGAAAACG AAGGCCAGAC CGAGGCCGAG
CTTTTCTTGC CGGGTACATT GCCGCATGCC CAGCAGGCGG AATGGATCAA TCACCTCCTG
AGCGTCGCGG CCCGCCTGGG CAAGCAGGAG GTGCGCGGGT ATCAGGTGTC GGCGCTGGAA
CTCAAAGACT GCAAACCGGG CAATCCCCCG GAGCTTGAAG AGCTGATCAC CCTGCCCCTG
ACCTTGGGCT CCGAACCCTT CGGTGCTTTG GTCATCTGCT CGCAGGATGC CTCAAAGCTG
GGTCAGGACC GCTTGCGCAT CCTCAGCTCC GCAGCCAACC ATCTGGCGCT GGCCATGCGC
AACGGCCTGG AATTCCGCAA GACCAAGGCC AGAGCGGACC ATGACGGCCT GACGCGCATC
TCCAATCGTC ACCATTTTGA CATCCGTCTG CGTGAAGAGA TGAAGCGCCA CCAGCGCCAC
CAGGATGAAC TGAGCCTGAT GATGATCGAC CTCGACTATT TCAAGTCAAT CAACGACACT
TACGGCCATC AGGCCGGAGA CATGGTGCTG CAGGAAGTGG GCAAGATTCT GAACAACACG
CTGCGGGAAT CGGATTTCCC CGCGCGCTAC GGCGGAGAGG AATTCGTCGT CATCCTGCCC
CAGACCAGGG AGGATCAAGC CTGGATCCTG GCTGAACGCC TGCGCTCCCA GATCGGCCAG
ACCTTTTTCC GTTCCCAGAA AAAACGTTTC CGGGTCACGG CCTCCATCGG CATCGCCGGC
ATCAAGCCCT GCGCGCTGAC CCCGCCGGAG ACTCTGCTCC GCAATGCGGA CACCGCCCTC
TACCAGGCCA AAACCAACGG GCGGAACATG GTCTGTTGCT CGGCCATCGA AGAAACGCAG
GCAGCCCACT AA
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| Protein sequence | MNALTRPCLG LALSSELASQ LEGHLPRTRV LENRSLSSAQ EFMSARTQGG LVFIAVSTWK
ELAPDDRERL IAHKSWQFML IADQHDPDAL EYMSSGTFLT LMTCPLDRAK ISRALQQAEE
VSNMYDDIFH MAREISLERE LLTRKNEQLA FLNQLLTRAS QTLDPAVILA NCSEDFAMLL
DVGNVLGVFW AENEGQTEAE LFLPGTLPHA QQAEWINHLL SVAARLGKQE VRGYQVSALE
LKDCKPGNPP ELEELITLPL TLGSEPFGAL VICSQDASKL GQDRLRILSS AANHLALAMR
NGLEFRKTKA RADHDGLTRI SNRHHFDIRL REEMKRHQRH QDELSLMMID LDYFKSINDT
YGHQAGDMVL QEVGKILNNT LRESDFPARY GGEEFVVILP QTREDQAWIL AERLRSQIGQ
TFFRSQKKRF RVTASIGIAG IKPCALTPPE TLLRNADTAL YQAKTNGRNM VCCSAIEETQ
AAH
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