Gene Dbac_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1717 
Symbol 
ID8377389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand+ 
Start bp1954887 
End bp1956098 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content67% 
IMG OID645000945 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_003158224 
Protein GI256829496 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.322555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCATG TTCTGGGGCT TGGACTGTGC CCGGCCCATC GTTCCCCGGA GACCCTGGAC 
CTCATCCGCT CGGCGGATCT GGTGGCCGGC GGAAGACGGC TCCTCGACGA ACTGGGCATC 
GAAGAGAGCA GACGCCTGCC CCTTGGGGCC CTGGAGGAAT TCGCGGCCCG CATCCAAAGC 
CGCGCAGAGG ACGGCATCGT CTGTGTCCTG GCCGACGGCG ATCCCCTACT CTACGGTATC 
GGAGCGAGTC TGCTGCGCTT CTTCGCCCCG CGCGAACTGA CCTTTCACCC CAATGTCTCG 
GCCCTGCAGA CCGCCTGCGC CCGTTTCGGC CTGCCCTGGC ACGAGTGCCG CGCCTTGTCC 
CTGCATGGCC GCGACGATCA GACCCCGCTC TTCGCCGCCC TGACCCACGG CAGCCTGGCG 
GCCCTGTACA CGGACCACCT CCACAGCCCG GACGCCATAG CCCGGCTGTT GCTTGAGCGC 
GGCGTGACGG GCTGGCGCAT GCACGTGGCC GAGGCCCTTG GAGGCCCGGA AGAACAGTTG 
ACCACAGTCA CTCTGCCGGA GGCCGCGCAG CGCTCGTGGC ACACGCTGAA CATCATTCTC 
CTGGAACGCA CACAGGCCCC AACGCTTACG CTGGAACTGG GCCTGGACGA AAACGCCCTG 
GCCCACGCAG GTGCCCTGAT GACAAAGCAG CCGGTCCGGG CTTTCGCCCT TTCCCTCCTG 
CGCCTGCCTC CGGACGCGAC CCTGTGGGAT CTGGGTGCTG GCAGCGGCGC CGTCAGTCTG 
GAAGCCGCGC GGCTCCTCGA CAAGGGGCGG GTGGTGGCAG TGGAACGCCA GGCCGAGCGC 
GTGCGCCACA TCAAGACAAA TGTGGAACGC ACCGGAGCGT GGTTAGTGAA GGCGGTGCAT 
GCTTCGCTGG AGTATTTTTT GGAGGATGGG AAGTATGCCC CCCCCACCCA CATCTTCCTC 
GGCGGCGGGG CCTCTGAGCC TGTCCTTTCC CGGTGCGCCG CCCTGCTTGC CCCCGGCGGG 
CGGCTGGTGG TGGCGGCCGT GCTCCTGTCC ACCCTGGAAA CGGCCCGCGC AGTCTTCAGC 
CGACTGGGCT GGCCGTTAAC CGTGCATCAG CTCATGCACC ACGCAAGCGC GCCTCTGGGC 
GGCGATGTGC GGCTGGTGCC TTCCAATCCC GTTTTTCTTC TGGAAACCCA AAAACCTTCA 
AGCGACACAT GA
 
Protein sequence
MIHVLGLGLC PAHRSPETLD LIRSADLVAG GRRLLDELGI EESRRLPLGA LEEFAARIQS 
RAEDGIVCVL ADGDPLLYGI GASLLRFFAP RELTFHPNVS ALQTACARFG LPWHECRALS 
LHGRDDQTPL FAALTHGSLA ALYTDHLHSP DAIARLLLER GVTGWRMHVA EALGGPEEQL 
TTVTLPEAAQ RSWHTLNIIL LERTQAPTLT LELGLDENAL AHAGALMTKQ PVRAFALSLL 
RLPPDATLWD LGAGSGAVSL EAARLLDKGR VVAVERQAER VRHIKTNVER TGAWLVKAVH 
ASLEYFLEDG KYAPPTHIFL GGGASEPVLS RCAALLAPGG RLVVAAVLLS TLETARAVFS 
RLGWPLTVHQ LMHHASAPLG GDVRLVPSNP VFLLETQKPS SDT