| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1661 |
|---|
| Symbol | |
|---|
| ID | 8377333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1890220 |
|---|
| End bp | 1892877 |
|---|
| Gene Length | 2658 bp |
|---|
| Protein Length | 885 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645000890 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003158169 |
|---|
| Protein GI | 256829441 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.247038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGAA TTCTCATGAC GCAGGCGCTG GCCGCATCGG TGTGTTTGAT GCTTGTGGTT
GTTTGCTGTG GCCCTGGCTT TGCCTCCACC GTGGAAATCG CCACCGGCCC CGACGGGCTC
CTGCAGATGG AGCAGCAGGG CAAGGTCACG GTCCGGGCTC TGCGGGGCTG GGGCAGGCTG
CCCGACGAGT ACGTGAAACT GGCGCAGCGG ATGCGGCAGG AGTCCGGGTT GGACCTCCTG
GGGGCGAATC TGGATCAGGT CCGGCAGTGG AGTGCGGACC CTGCCCTGGC GCAGTTCGGC
GCCGAACTGG CCAAGCTGGC CGCCTTCATG GAAGGCGGTG AGCATCTCGA CTGGTCGCCG
CCCGCCCCGG GCGCTTCCGT GCCCGCCGGC ACCCTGGTGC GCAGCGGCGC CACGCGCTGG
GCACAGGCCG AGGACGGTCC CGTCGAAGTC CCGAGCGCTG TCCAGGCGGA GCCCGCTCCG
ACCGAGACCG TTGCGACCGA GCCTGTCCAG GCGGAGCCCG CCCAGGCCGA ACCCGTCCTG
GTTGATCCTG TTCAGGCCGA GCCTGTTCAG GCTGAGCCTG TTCAGGAGGG GGGCACGAAT
ACGACGTCCT CCCTGCCTCC GGCCGCCCCC AGCGACGCAG GGCCGGGGGA TGGCGTGGAG
TTTCCCCTCA ACGATCAGGT GCCGGGAACG TACAGGGTCA AATTGCAGGT GGAGGGGCTT
TCCGTCGCCG CTCCGCAGGA TGACCCCTAT TTCCAGCGGC GTCTGCAGCA CATGCTGCCC
GAGGACCCCG CTGTGCTGGC AGGAGAGAAA GGGTATTTCA ACAAGCTTTC CGAATATCTG
AACGTGAAGC CCGTGCTTGA CGACGACGCC TCCTACAACC TCGTCCTCGG GTTCGCCACC
CCGGACACGC CGGTGGTCAT CCGCGTCGAT GCCCCTGATA ACCCGGAAAT CCCCTTGAGC
GAGAAGGAGA TCGCGGACAG GATTTCCTAT CGCGTGGCCG GCAAATCGGT TTATGTGTAC
GAGCACGACG AGGCCAGAGG CGACGCCGAC ATTGGTTTCG ACGACAAGCT GGACGGCGAG
GTGCGCTGGA CCCCCCGCAT CGACCCCGCC ACCGGTCGCC CGGTCGGCCC CAGGGTTCTG
GGCATATACA TGTCCTACAG GATCAAAAAG TACATCGGCG ATAACGAGCT GGGCATTTTA
AGCACCAGCC AGCACCGCAT CGGCTGGGTC GTGGTGGCCA TGCCGGGCGA CGTGTACGAG
CATGAAGGCG CGCTGTACGC CGTGGGTCAG GAGGAGTCCC TGTCGGCGGG CGGGACTGCC
GGACCGGCTC CCGCGCCGGA GAAGTTCGAT TTTCAGGTGT CCCAATATGC CCTGGACGAG
ACCGCCATCG GCCTTTCGGA GGATCTGCGC CATGTGGCCT GGGTCGAGGG CGAGAAAGAG
GGAAAGAAGC GCGTTGTCGT CAACGGTGTC CCCGGAAAAT GGTACGATGA CGTCAAGGGA
TACGCCTTGC GCTTCACGCC CGGGGGAGAG ATGTTCCGCT ATGAGGCCGA GCTGGGTGAG
AAGGAGATCC CTGTGTTCAA CGGGGCCGAC GGCCCGATCT TCGACGACCT CGAATTCGTG
GATATGAGCG CGAGCGGGGA ACATGTCCTG GCCGGAGGCA AGACGGGCAG CGTGTACCGG
GTCTATCTCG ACGGCAAGCA GGTGCGGGAG ACGAACGCCT CCGTGCGGGA CGGAGCCGTG
GCCGAGAACG GAAAAGCAGC CTGGATAGAA AGGGGGCAAG ACCCTCAGAC CGGGGCCGAG
TTCGCCATGG TCGTGACCGC CGATGGTTCC GAAGGGCAAA AGTACCCGGC TATTCACGGC
AGCCCCCGAT TCACGCAGAA TCGCGCCGAA CTCTATTATA TCGCCGAAAA AGAGGGCGGG
GACCGCTTTC TGGTGCGTGA CGGCGAAGAA CTGAAGCCCA CCATGGGGAG CGGCTACAAG
TTCTCGGTGA CTCCCGACAG CGCCTTTTAT GCCTATGTCG CCCAAGTGGA CGAGAGTGTG
AGGTCAATGG TCATTAACGG GCAGATCGGA CCTGATTTCA GTGACATCTG GGATCCGGCC
ACCTTCAGCG CCGACGGCCA GCGGCACATC TATTCGGCCA AAAAGGAAAA GGAGTCTTTT
CTGGTGGTCG ATGGCCAGAT CGTTTCCCAC GGCTTCGGAG CGCTGAAAAG CGTCGTCGAT
GAAACCTTCA GTCCCGACGG TAGTCGCTGG GCGGCGGGCT TTCAGCTGAG TGACGAGGAA
TACGTCGTCG TCGTGGACGG CAAGGAGATC GGCCGGGGCC AGGGCTCGCC CAGGGGGATC
GTCTTCAGCC CCGACGGGAC CAGGGTGGCG TGGCTGGAAA AGCAGAAGAC GTCCGCGCGC
ATCTGTCTCG ACGGACAGGC CGGGCCGGAG GCGAGGGACA TCTACGACGA AGAGCCTCCG
CAGTTCAGCC CCGACGGGCG GCATCTGGTC TATTTCACCC GCGACCGCAA GGAAAAGAAG
ATGCACATCG TCGTGTTCGG CGGCGAGGAG CGCGCCCACG ACATCATTCC GCCCCGCGCG
GTGTTCGTGG AGGGTGGCCT TGAGTACCTG GCCATCGACG GGACGCACTT CCGGCGAGAG
AGCATTCCCC TCGACTAG
|
|---|
| Protein sequence | MRRILMTQAL AASVCLMLVV VCCGPGFAST VEIATGPDGL LQMEQQGKVT VRALRGWGRL
PDEYVKLAQR MRQESGLDLL GANLDQVRQW SADPALAQFG AELAKLAAFM EGGEHLDWSP
PAPGASVPAG TLVRSGATRW AQAEDGPVEV PSAVQAEPAP TETVATEPVQ AEPAQAEPVL
VDPVQAEPVQ AEPVQEGGTN TTSSLPPAAP SDAGPGDGVE FPLNDQVPGT YRVKLQVEGL
SVAAPQDDPY FQRRLQHMLP EDPAVLAGEK GYFNKLSEYL NVKPVLDDDA SYNLVLGFAT
PDTPVVIRVD APDNPEIPLS EKEIADRISY RVAGKSVYVY EHDEARGDAD IGFDDKLDGE
VRWTPRIDPA TGRPVGPRVL GIYMSYRIKK YIGDNELGIL STSQHRIGWV VVAMPGDVYE
HEGALYAVGQ EESLSAGGTA GPAPAPEKFD FQVSQYALDE TAIGLSEDLR HVAWVEGEKE
GKKRVVVNGV PGKWYDDVKG YALRFTPGGE MFRYEAELGE KEIPVFNGAD GPIFDDLEFV
DMSASGEHVL AGGKTGSVYR VYLDGKQVRE TNASVRDGAV AENGKAAWIE RGQDPQTGAE
FAMVVTADGS EGQKYPAIHG SPRFTQNRAE LYYIAEKEGG DRFLVRDGEE LKPTMGSGYK
FSVTPDSAFY AYVAQVDESV RSMVINGQIG PDFSDIWDPA TFSADGQRHI YSAKKEKESF
LVVDGQIVSH GFGALKSVVD ETFSPDGSRW AAGFQLSDEE YVVVVDGKEI GRGQGSPRGI
VFSPDGTRVA WLEKQKTSAR ICLDGQAGPE ARDIYDEEPP QFSPDGRHLV YFTRDRKEKK
MHIVVFGGEE RAHDIIPPRA VFVEGGLEYL AIDGTHFRRE SIPLD
|
|---|
| |