| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1631 |
|---|
| Symbol | |
|---|
| ID | 8377303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | - |
|---|
| Start bp | 1845738 |
|---|
| End bp | 1847417 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645000860 |
|---|
| Product | acetolactate synthase, large subunit, biosynthetic type |
|---|
| Protein accession | YP_003158139 |
|---|
| Protein GI | 256829411 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.541906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTCCA TGACCGGCGC GCAACTGACC ATTGGCCTTC TGGAACGCCA AGGCATCCGC
ACCATTGCGG GCATCCCCGG CGGCGCAAAC CTCCCCCTTT ACGACGCGCT TTCACGCAGT
ACCCGCATCC GTCACGTCCT GACCCGCCAT GAGCAGGGCG CGGGCTTTCT GGCCCAGGGC
ATGGCCCGGG TCACAGGCCG CCCGGCCGTC TGTTTCGCCA CCTCCGGGCC CGGCGCGACC
AACATCCTGA CCGCCATCGC CGACGCCAAG CTCGATTCGG TGCCCGTCAT CTGCATCACC
GGACAGGTTC CCCGGGCCAT GATCGGCACC GACGCCTTTC AGGAGGTGGA CACCTACGGG
ATGAGTATCC CCATCACCAA GCACAATTTT CTCGTGCGCC AGGCCCGCGA CCTCCTGCAC
ATCATTCCCG AGGCTTTTTC CATCGCCACC AGCGGGCGTC CCGGTCCGGT GCTGATCGAC
ATCCCCCGCG ATGTCCAGCT GGAGATGGTC GATTTTGGGC AGTGGCCCGA GATCGGCGAG
CGCGAGCCCG TGCCGGCCTG TTTCGACGGT GATCTCGACC TGGCCGTGGA GATGCTCAAT
TCCGCCCGGC GGCCGATTTT ATGGCTTGGC GGAGGAGTGG TCGCCTCGGG CGCGGGCCGG
GAGATGCTGA CGCTGGCCGA ACGCCTCTCC ATGCCCGTGA CCTCGACGCT GATGGGGTTG
ACCGTCGTTC CCCACGACCA TCCGCTGAAC ATGGGCATGC TCGGCATGCA TGCCCAGCGG
CACACCAACA TGGCGCTTGA GGCCTGCGAC CTCATCCTGG CCGCCGGGGT GCGCTTCGAC
GATCGCGCCA CGGGCAAGGT GCAGGAGTTC TGTCCCCAGG CCAAAGTCAT TCATATCGAC
ATCGACCACA GCGAGCTGGA CAAGCTCAGG GCCGCCTCCC TGCCCATTCT GGGCGATGTG
CGCGACGTGG TGCGCGCTTT GCTGCCCAAG GTCGAACCCG CCGAACGTCA GGAATGGATC
GGGTACATCG AGGCCTTGAA GCGGGCCTTT CCCTCCCGCA TTCCGGAGCA GGGCGGGCAC
GCCACTCCGC TGGAACTCAT CCGCCGGGTG GGGGAACTGG CCGGAGACTC GGCCATTGTG
GTCACCGACG TGGGCAAGCA TCAGATGTGG GCGGCGCAGG GCTATCCCTT CACGCCCGGT
ACCGGCTGGT TGACCTCCGG TGGCCTCGGC ACCATGGGTT TTGGCCTGCC CACGGCCATC
GGCGCGGCTC TGGCGGCGCC GGAGCGCAAG GTCGTCTGCT TCAGTGGTGA CGGCAGCCTG
CTCATGAACA TTCAGGAAAT GGCCACGGCC GCCGAACAGG GCGTGGACGT GACCGTCGTT
CTCATGAACA ACGCTTCCCT TGGCCTGGTG CACCAGCAGC AGGAACTTTT TTTCAAGGCC
AATTATTTTT CATCCATTTA CGACGTGAAC GTGGATTTCG GGCTCATCGC CTCGGGTTTT
TGCTGGAAAA CCTGGGATCT GGCCGGAGCC GCCGATCCCG ACGCTGTGCT GGGTGAGGCC
TTGGCCCACC GGGGGCCGAC CCTGATCCAT GTCCCGGTGG ACCGGGACGA GAAAGTCTGG
CCCATGGTCC CTCCCGGGGC TGCCAACAGA ACCATGCTTG GAGGTGAATG CCATGCATAG
|
|---|
| Protein sequence | MFSMTGAQLT IGLLERQGIR TIAGIPGGAN LPLYDALSRS TRIRHVLTRH EQGAGFLAQG
MARVTGRPAV CFATSGPGAT NILTAIADAK LDSVPVICIT GQVPRAMIGT DAFQEVDTYG
MSIPITKHNF LVRQARDLLH IIPEAFSIAT SGRPGPVLID IPRDVQLEMV DFGQWPEIGE
REPVPACFDG DLDLAVEMLN SARRPILWLG GGVVASGAGR EMLTLAERLS MPVTSTLMGL
TVVPHDHPLN MGMLGMHAQR HTNMALEACD LILAAGVRFD DRATGKVQEF CPQAKVIHID
IDHSELDKLR AASLPILGDV RDVVRALLPK VEPAERQEWI GYIEALKRAF PSRIPEQGGH
ATPLELIRRV GELAGDSAIV VTDVGKHQMW AAQGYPFTPG TGWLTSGGLG TMGFGLPTAI
GAALAAPERK VVCFSGDGSL LMNIQEMATA AEQGVDVTVV LMNNASLGLV HQQQELFFKA
NYFSSIYDVN VDFGLIASGF CWKTWDLAGA ADPDAVLGEA LAHRGPTLIH VPVDRDEKVW
PMVPPGAANR TMLGGECHA
|
|---|
| |