Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_1614 |
Symbol | |
ID | 8377286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 1829635 |
End bp | 1831176 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645000844 |
Product | protein of unknown function DUF1078 domain protein |
Protein accession | YP_003158123 |
Protein GI | 256829395 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.621437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATCT CCTCTTCCCT TTATATCGGC ACCACGGGGA TCATGGCCCA ACAGAAGAAC ATGGCGGTCA TTTCCGACAA CATAGCCAAT GTGAGCACGG TTGGATTCAA ATCCTCGCAC ATGATCTTCA ATACCCTGAT GAGCCAGCAG ATGGGCTCGG CGAGCGTCAG CAACCAGGTC GGGCAAGGCG TCGGCGTCAG TTCCATTCTG TACGACATGT CGCTGGGAGC GCTGGAACCG ACCAACACGG CCACCGATAT CTCCATCAGC GGCAAGGGAT TTTTCATCGT CTCGCCCAAC GGAAGCAGCG ACCAGCATTA TACCAGAGCC GGCAACTTCC GCTTCGACGC GGAAGGCTAC CTGCGTGATC CGCAAGGGAA CATCCTGCAG GGCTATCGGA TGCCGGCGGA ATCCATACTG GACACGGCGC CTGTCATTCC GCCCGCCGCA AGCGCTCCCA TCACGGACAT CCGTCTCGAC ATGCAGGACG GCGGAGGTCC CGTCTCCGAA CCCGAAGCGA CGACGGAAAT GCGCATGATG ATCAACCTCG ATTCAAGCTC GCAAGAACGG AGCACCAGCA CGACCAGCCC CTTCACGGCC CTCTTCGACA GCTGGGATGC GACGCAGCCG GAGCCTTTGG ACGCGGGGGC CTACTCGTAT CAATCGGCCA TGAAGATCTA CGATTCCGAC GGCGGAGCGC ATGAGGTCAG GGCCTATTTC GATCCTGTGC AGGACGGCGC GAGCGTCCCC AGCGGCAACC GCATGTGGGA ATTTCTGGTC ACCATCCCGC CCACGCAAGA CGCCTCCGGC CTGGACACGA AAAAAGGCGT GCTCATGACC GGAACCCTGA CCTTCACGGC ATCGGGCGAA CTGTTGAACA TGAGCGCCTT CGAAGGCTCC TCCGACGACA AAAACAGCTG GGTCCCGGTC AATTTGTCCG AAGACGGCTA CCCTGTCCTG AACGTGAACC TGGTCGGAGC GGAGCCCATC TCAAGCGCTC TGGACATGGG ACTGCGCTCG AATTCCGGCT GGGCGCTGCC TGCGGGGGTG AACACCCTGG CCGATCTGGG CACGGCGATT TCGGATTTGC CTTCCTTGCA AAACGCGGAC AGGCAGATCC TCTCGATCAC CAATTTCAAC TCCGGATCCA GCACCCTCTA TCAATCCCAG AACGGATATG AACGCGGATT CCTGCAATCG GTCAGCGTGG ACACCGCAGG AGTGCTCGTC GGCTACTTTT CCAATGGTCA GAATCAGGGC CTCTACAAGA TCCCCATGGC CGATTTCATC AATCCGCAGG GACTCTTTCG AGAAGGAGGA AACCTTTTTT CCGCCACCAA GGATTCCGGG GCCGTCTCTG TGGGTTGGGC CGGAGAAGGC AGGCTTGGAA GCGTCATCAC CAGCAGCCTG GAAAATTCCA ATGTCGACCT GGCCACCGAA TTCGTGAACA TGATCATCAC TCAAAAAGGA TTCGACGCCA ACAGCAAGGT CATCACCACA GGCGACCAGG TCGTGCAGAC GGCCATCCAG ATGAAGAGAT AG
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Protein sequence | MSISSSLYIG TTGIMAQQKN MAVISDNIAN VSTVGFKSSH MIFNTLMSQQ MGSASVSNQV GQGVGVSSIL YDMSLGALEP TNTATDISIS GKGFFIVSPN GSSDQHYTRA GNFRFDAEGY LRDPQGNILQ GYRMPAESIL DTAPVIPPAA SAPITDIRLD MQDGGGPVSE PEATTEMRMM INLDSSSQER STSTTSPFTA LFDSWDATQP EPLDAGAYSY QSAMKIYDSD GGAHEVRAYF DPVQDGASVP SGNRMWEFLV TIPPTQDASG LDTKKGVLMT GTLTFTASGE LLNMSAFEGS SDDKNSWVPV NLSEDGYPVL NVNLVGAEPI SSALDMGLRS NSGWALPAGV NTLADLGTAI SDLPSLQNAD RQILSITNFN SGSSTLYQSQ NGYERGFLQS VSVDTAGVLV GYFSNGQNQG LYKIPMADFI NPQGLFREGG NLFSATKDSG AVSVGWAGEG RLGSVITSSL ENSNVDLATE FVNMIITQKG FDANSKVITT GDQVVQTAIQ MKR
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