Gene Dbac_1547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1547 
Symbol 
ID8377216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1750912 
End bp1752162 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content64% 
IMG OID645000774 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_003158056 
Protein GI256829328 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.333927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAC TTGTCATAGA AGGCGGCGTG CCGCTGAAGG GAGAGGTGCG GATCAGCGGC 
TCCAAGAATG CGGCCCTGCC CATCCTGCTC GCATCCATTT TGGTCGAAGG CGAGGTGCGC
CTGACCAATG TGCCGGACCT GCGCGATATC GCCACCACGC TGAAGCTGCT CGAACTGCTT
GGCTGCCGCG CTGAATTCAA TGACGGGGAC GTGCTCTTGC ATTCGTGCGA CCTGAAGCCC
GAAGCCCCCT ATGACCTGGT GCGGACCATG CGTGCCTCGG TGCTGTGCCT GGGGCCGCTC
CTGGCCAGGC TCGGCCGGGC ACGGGTGGCC ATGCCCGGCG GCTGCGCCAT CGGAGCGCGG
CCCGTGGATC TGCATCTCAA AGGTCTGGAA CAGATGGGAG CCGTCTTCGA ACTGGAGAGC
GGCGACATCA TCGGGACCTG CGACCGTCTC AAAGGGGCCC ATATCCATCT TGATTTCCCC
ACCGTGGGCG GCACTGAGCA TCTGATCATG GCCGCTGTGC TGGCCGAAGG GGAGACAGTG
CTCGAAAACG CGGCCCGCGA GCCGGAAATC CAGGATCTGG CGGAATTTTT GAACACCTGC
GGGGCGCGCA TCACCGGCCA TGGCACCAGC GTGGTGCGCA TCGAGGGTGT CGAATCCCTG
CACGGCTGCT CCTATCCCGT CATGCCCGAC CGCATCGAAG CAGGGACCTA TCTTGTGGCC
GCGGGAATGA CCAAGGGCGA CCTGACCCTG CGGGACTGCC CGGTGGACGC CCTTGACGCC
GTCATCTCGA AATTGCGTGA AATGGGCATG GTCATCGAAG GTGATCGCAA CCTTCTGACC
GCCACTGTCG ACGGCCCGCT GAACTGCGTC GATCTTTCCA CCAGACCCTA CCCCGGCTTT
CCCACGGACA TGCAGGCCCA GATCATGGCG CTCATGTGCG TCAGCCGTGG CGCTGGCGTG
ATCACCGAAG GCATCTTCGA GAACCGCTTC ATGCACGTGC AGGAACTGGC CCGCCTTGGC
GCGCATATCA CCCTGTCCGG GCAGAGCGCC ATGGTGCGCG GTGTGGATAC CCTGAAAGGC
GCCACGGTCA TGGCTTCGGA TTTGCGCGCC AGCGCCTGTC TGGTCCTGGC CGGGCTTGCA
GCCACGGGGC GCACCGACGT TCGCCGTATC TATCACCTTG ATCGCGGCTA CGAACAGATG
GAAGTGAAGC TTGGCGCGGT GGGGGCCAGG ATCAGGCGCG AGAAGGAATA G
 
Protein sequence
MDKLVIEGGV PLKGEVRISG SKNAALPILL ASILVEGEVR LTNVPDLRDI ATTLKLLELL 
GCRAEFNDGD VLLHSCDLKP EAPYDLVRTM RASVLCLGPL LARLGRARVA MPGGCAIGAR
PVDLHLKGLE QMGAVFELES GDIIGTCDRL KGAHIHLDFP TVGGTEHLIM AAVLAEGETV
LENAAREPEI QDLAEFLNTC GARITGHGTS VVRIEGVESL HGCSYPVMPD RIEAGTYLVA
AGMTKGDLTL RDCPVDALDA VISKLREMGM VIEGDRNLLT ATVDGPLNCV DLSTRPYPGF
PTDMQAQIMA LMCVSRGAGV ITEGIFENRF MHVQELARLG AHITLSGQSA MVRGVDTLKG
ATVMASDLRA SACLVLAGLA ATGRTDVRRI YHLDRGYEQM EVKLGAVGAR IRREKE