| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1509 |
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| Symbol | |
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| ID | 8377178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfomicrobium baculatum DSM 4028 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013173 |
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| Strand | + |
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| Start bp | 1704422 |
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| End bp | 1706929 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645000736 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003158018 |
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| Protein GI | 256829290 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0192657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGTCGC TCCGGGCCGT GCTTCTGCTC TTGATCCTGG CCCTGTGCCC GGCAAGCGCC
CTTGCGGCCA AACAGGTTCT CATCCTCAAC TCCTACCACC CGGACTACAA ATGGTCCTCC
GACATCATGC ACGGTCTGGA GGCGACCCTG CATCAGTACG ATCCGGAAGT GTTCATTCAT
GTCGAGCACA TGGACACCAA GCGCAACCTC GATCCCGCCT ATCTCGCCGG CCTACCCAGA
TTCATGGAAC TCAAATACGC TTTCCTGCGC CCCGATCTGG TCATCACGGT GGACGAAAGC
GCCTTCTTTT TCTTTCTTGA ACACGGGGCA CGCATCTTTC CGGACACGCC GGTCGTGTTT
TGCGGCGTGA ACACCAACCC CCTGCCCCCG CTGCCCAAAA ACATGACCGG CGTGCGCGAG
TACTCGGACC TGAACACGAA CGTGAAACTC ATGCGCAGGT TGCATCCGCA AATGCGCGAG
CTCGTGGTCA TTGCGGACAA GACGGCAACG GGCGATGCCG CCGTGGCTGA GTTGCGCAAG
GCCGTCCCGC CGGACCTGCC TCTGCAGGTG CTTGAGGATA TGCCGCTGCC GGACCTGGTA
GACAGGGTCA AAGAGATTGG ACCGGAAACG GGACTTCTTT TTCTGCTCTA TTTCCAGGAC
CGCGATGGGC AGGTCTATGA CGCGACGGAA GCCATCTCGG CCATTTCCGG GGCCAGCCCC
GTGCCGGTTT ACGGAATCTG GAATTTTCTC ATGGGGCATG GGCTTTTCGG CGGATATCTG
ACCAACGCAT ACGAACAGGG CCGGGTGGCA GGCAACATGG CCGGGCAGAT CCTGTCCGGA
AAAAATCCCG CCGACGTTCC CGTCACCTAT GACGACGGAA TCCAGCTTGA AGTGGACATG
CGGCAAATGG AACGATTTGG AATCACGCCG GACCGGCTGC CCCCCGATAC CAGATTTTTC
AATGCCAAAG CGGATACGGA GCACGAAATT CTGCTTCTGC ATTCCTACCA CACGGGATTC
AAGTGGACTG ACGACCTGCA GGCCGGAATC CGGGAAAGCC TGGGCGCGGA CGCCGCAAAA
CTCGAAATGC ATGTCGAATA CATGGACACC AAACGGCATC CCGAGCCTGA ATTCACCTAC
CTCAACTACA CCGTGCTGCG CGAAAAATAC CAGTCCACCA ATTTCTCCGT CGTGCTGACC
TCCGACGACA ACGCCTTCAA TTTTGCCCGC CAGTACCGGC AGACCTTGTT CAACAACGCG
CCCATCGTCT TTTGCGGCGT GAACTATCTT GCGGACCCCG CGTCCCTTTC CGCGCAAGGC
ATTACGGGCG TGCTCGAATC CTACGACATC GTCGCTACGG TGCAGGCCGC AGCCGGGCTC
CTGCCCAAAG CCACGAAGCT CTATGTCATC AACGACGCCA CGCCGACCGG CATCGGCAAC
CACAACCGCT TTGAAGAAGT GCGTCACCTC CTGCCGGACC GACTCGACAT CGAACTGCTC
GAGAACATGT CCATGACCCG TCTGCTGGAA CGCCTGCCCT CGCTGCCACC GGACAGCTTC
ATCCTGCTCA TGAGCTTCAA TCAGGATCGG GACGGAAACA CCTATTCCTA CGAAGAGAGC
TGCAGAAAAA TCGTGGACGT CAGCCCCGTG CCCGTCTTTT CCTTCTGGGA CTTCTACCTG
GGCTCGGGAT CCGTGGGCGG AATGGTCACC AGCGGCCGCC ACCAGGGATT GGCGGCGGGA
AATCTGGCCC GGAGCATCCT TGGCGGGCAA AAGGCCGAAG ACCTGCCCAT CATTACCAAA
AGTCCCAACG CGCTCATTTT TGACGCCGAT GCCATGAAAA AGCATGGTCT GGACTTCAGT
CTGCTTCCCA AAGGAGCCGC TCTCATCAAT GATGACCCAG ACTCATCCCG CTACACGCGC
GCCGTGTGGA CAATCACGGT CCTGATGCTG ATCATCGCCA TGCTGCTTTT CATCTTTGTC
TTCGTTTACC GTCACCAGCA CCGCAAACGC CGGGCTCTGG AACATTCCGT GCGCATTGAT
CCCCTGACCG GGGCGAGCAC CAGAAGCGCC TTTGATTCGG AAATGCCGCA CCGGCTCAAA
ATCGCTACGG AGAAAAATGA AAAATTCATG TTCTGCTACG TGGATGTGGA CAAGCTCAAG
CAGGTCAACG ACACGTACGG GCATATCCAT GGCGACACCT ATTTGAAGGA AGTCGTCTCC
ATCATCCGCG CCTGCATCCG CGCCAGTGAT GAAATCTATC GTGTCGGCGG AGATGAGTTC
GTGCTGATCT TTCCCGGATG CGGCCCGGAG GAGCTACAGC GGATCTGGGG ACAGGTGCAC
GCCCATATCG ACGCCCTCAA CAACTCCGGC ACGATCCCTT ACACCATGGG ACTCACGCAC
GGATGCACGG TCTTCAATCC GCAGGAACCG CAGGATATCG CATCCCTGCT CAAAAAAGCC
GACCAGTCCA TGTACCGCCG AAAGCAGCCC CACTCGTCCC AACCCTGA
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| Protein sequence | MPSLRAVLLL LILALCPASA LAAKQVLILN SYHPDYKWSS DIMHGLEATL HQYDPEVFIH
VEHMDTKRNL DPAYLAGLPR FMELKYAFLR PDLVITVDES AFFFFLEHGA RIFPDTPVVF
CGVNTNPLPP LPKNMTGVRE YSDLNTNVKL MRRLHPQMRE LVVIADKTAT GDAAVAELRK
AVPPDLPLQV LEDMPLPDLV DRVKEIGPET GLLFLLYFQD RDGQVYDATE AISAISGASP
VPVYGIWNFL MGHGLFGGYL TNAYEQGRVA GNMAGQILSG KNPADVPVTY DDGIQLEVDM
RQMERFGITP DRLPPDTRFF NAKADTEHEI LLLHSYHTGF KWTDDLQAGI RESLGADAAK
LEMHVEYMDT KRHPEPEFTY LNYTVLREKY QSTNFSVVLT SDDNAFNFAR QYRQTLFNNA
PIVFCGVNYL ADPASLSAQG ITGVLESYDI VATVQAAAGL LPKATKLYVI NDATPTGIGN
HNRFEEVRHL LPDRLDIELL ENMSMTRLLE RLPSLPPDSF ILLMSFNQDR DGNTYSYEES
CRKIVDVSPV PVFSFWDFYL GSGSVGGMVT SGRHQGLAAG NLARSILGGQ KAEDLPIITK
SPNALIFDAD AMKKHGLDFS LLPKGAALIN DDPDSSRYTR AVWTITVLML IIAMLLFIFV
FVYRHQHRKR RALEHSVRID PLTGASTRSA FDSEMPHRLK IATEKNEKFM FCYVDVDKLK
QVNDTYGHIH GDTYLKEVVS IIRACIRASD EIYRVGGDEF VLIFPGCGPE ELQRIWGQVH
AHIDALNNSG TIPYTMGLTH GCTVFNPQEP QDIASLLKKA DQSMYRRKQP HSSQP
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