Gene Dbac_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1456 
Symbol 
ID8377121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand- 
Start bp1645361 
End bp1645897 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content58% 
IMG OID645000680 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridin epyrophosphokinase 
Protein accessionYP_003157966 
Protein GI256829238 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00251106 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAAC CAAGCGCCTC TCAGGCATAT CTCAGTCTGG GGTCCAATAT CGGAGACCCC 
GTGGCCAATG TGAAGCAGGC CATCAAAGCC CTGGACAGCG CCCCCGGCCT TGAGGTGGAC 
GCCGTGTCCC CGATTTTCCG GACGGAGCCG CAGGGGGTGC GTGACCAGGA CTGGTTCGCC 
AACTGCGTGG TACGTCTGAA TGTTCGTGCT TCGTATTCCC CCGAAGAGCT GCTTGGCGTC 
CTGGCAGGAA TTGAGACACA GATGGGCCGG GTCCGCGCGA AGCGTTGGGG ACCACGGGTC 
ATAGATATCG ACATCCTCCT TTACGGAGAC ATGCAGTGGA ATTCGCCCAC GCTTCAAATC 
CCTCATCCAC GCATGACCGA GAGGGCTTTT GTGCTCGTCC CGCTCATGCA TCTGGCTCCG 
GATATCCGCA TCCGGGACTT TTATCCATCA CAGTGGCTGT CCCGGCTTCC GTATCGCCTT 
GAAGGAGATC GGATCTTGCA GGCCACCAAC GTTATTTCCG AGGTGAACAA TGCTTAA
 
Protein sequence
MPKPSASQAY LSLGSNIGDP VANVKQAIKA LDSAPGLEVD AVSPIFRTEP QGVRDQDWFA 
NCVVRLNVRA SYSPEELLGV LAGIETQMGR VRAKRWGPRV IDIDILLYGD MQWNSPTLQI 
PHPRMTERAF VLVPLMHLAP DIRIRDFYPS QWLSRLPYRL EGDRILQATN VISEVNNA