| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1439 |
|---|
| Symbol | |
|---|
| ID | 8377104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 1629922 |
|---|
| End bp | 1630749 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645000663 |
|---|
| Product | transcriptional regulator, DeoR family |
|---|
| Protein accession | YP_003157949 |
|---|
| Protein GI | 256829221 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0159016 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAACG CCCGCCCCGA CAAAAGCGAA GGCCAGGACA CGGGAGCCCG GCATGTCACG
GTCCGTCAAC GCCATGCCGA AATGATCCGC ATGGTCCGGG AGACGGGTTT CGCCACCATC
CAATCCCTGG CCGACCATTT CGGCATCACC CCGCAGTCCG TGCGCCGGGA CATCAACACC
CTGAACGCCA AGGGCCTCGT GCAGCGCTAT CACGGCGGGG CGGGGCCATG CCTGAGCACG
GAGAACATGG ACTACCTGGA CCGAAAAGTG CTCTGCCTGG CCGAAAAGCG GGTCATCGGG
CAGATGGTGG CCAGGGCCAT CCCCAACAAG TCGTCGCTCT TCATCAACAT CGGCACCACC
ACCGAAGAGG TGGCCCGGGC CCTGGGCGGA CACAAGAACC TGCGAGTCAT CACCAACAGC
CTCAATGTGG CCTCCATCCT GACGGGAAAC CCGGAGGTGG AGATTATCGT GGCCGGCGGC
CTGATCCGGC ATCATGACGG AGGCATCGTC GGCGAGGCGG CCATCGACTT CATCCGCCAG
TTCAAGGTCG ACTTCGGGAT CATCGGCATC AGCGGCATCG ACATGGATGG CACGCTGCTT
GACTTCGACT ACCGGGAAGT GCGCGCGGCC AGGGCCATCA TGGAAAATTC CAGACAGGTC
TTCCTGGTCA CGGACCATAC CAAATTCGGT CGCAACGCCA TGGTGCGCCT GGGCAACATC
GAGGAAATCG ACTCCCTGTT CACGGACAAG ACGCCGCCGG CGAGCGTGCT TGAGCAGATG
AAACGCGGGA ACGTGAAACT GCACGTCGAT GAAGATTCGG AAATTTGA
|
|---|
| Protein sequence | MHNARPDKSE GQDTGARHVT VRQRHAEMIR MVRETGFATI QSLADHFGIT PQSVRRDINT
LNAKGLVQRY HGGAGPCLST ENMDYLDRKV LCLAEKRVIG QMVARAIPNK SSLFINIGTT
TEEVARALGG HKNLRVITNS LNVASILTGN PEVEIIVAGG LIRHHDGGIV GEAAIDFIRQ
FKVDFGIIGI SGIDMDGTLL DFDYREVRAA RAIMENSRQV FLVTDHTKFG RNAMVRLGNI
EEIDSLFTDK TPPASVLEQM KRGNVKLHVD EDSEI
|
|---|
| |