Gene Dbac_1425 details

Gene Information

• Locus tag: Dbac_1425
• ID: 8377090
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfomicrobium baculatum DSM 4028
• Kingdom: Bacteria
• Replicon accession: NC_013173
• Strand: +
• Start bp: 1605792
• End bp: 1609082
• Gene Length: 3291 bp
• Protein Length: 1096 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 645000649
• Product: multi-sensor hybrid histidine kinase
• Protein accession: YP_003157935
• Protein GI: 256829207
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.579353
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCACAC GAGAAAACGA CCTGAAGACT AATCCCGAGC AGGGACAGGC ATCTGAAGAT 
CTACTGCGTG AGCTTGAATC GCTGCGCCGC AGGGTGACCG AACTTGAAGA CATTACCTGC 
GCGGCAGCAC TGGCCGAGGA GACCCTGGCT CACCAGGACG CGCTCATGCA GGCCATGCTG 
CGCAATCTGC CCCTGGATTT CTGGGCTCGA GATTTGAACG AAAACATCAT CATACAGAGC 
GACGCATCCG TGCGCCTGTG GGGCGATCTG TCCACCACCA GGGTCGACGA CGCCGACGTT 
TCGGAGGAGA TCCGCAGCAC CTGGCGCTCG GTCAACGAAC GCGTCTATGC GGGGGAGGTC 
CTTACGGGCG AAAAGGAATA CGTCCTGCCA AACGGCGAAA AACGCATTTT TCGCGACATC 
GTCGCCCCCA TTCGCAAAGG CGACGAAACC CTGGGCATCC TCGGCACCAA CATCGACATC 
ACGGAGCATG TGCACAGCAT CCTCGCCCTG CATAAGAGCG AGGCCCACCT GGCCTCCCTG 
CTCAATTCCA TCGACGAGTC CGCGGCGCTG CTCGAACCGG ACGGCAAGGT CATCACCGTC 
AACAAGACCT TTGCCGCCCG GGTGGGCAGG ACCGTCGAGG AATGCCTGGG CCAGTCCATC 
TATGATTTCA TTCCCCCTGA AGCCGCGCAG ACCCGAAAAC GCATGGTCGA AGACCTGGTG 
CGCAACGCCC GGCCCGTGGC CTTCGAGGAC GAACGCCATG GCCGCTGGAT GCGCCACAGC 
CTGAGCCCGG TGCTCGGCTC CGACGGCACG GTGGCGGCGG TGGCGATTTT CGCCATGGAC 
CTGACCGAGC GCAGGCGCCG TGAAGCCCTC CTGCTCGCCC GCCAACGGCT CGGCGAATAC 
GCCATCAACC ATTCCCTCAA AGATCTCTTG CGCAAGGCCC TGGACGAGGC CGAAACCGTG 
ACCGGCAGCA CGCTGAGCTT CCTGCATTTC CTTGACGAGA AGCAGCGGAC CATGACCATG 
CAGGCCTGGT CCACCAGGAC GCTGCGCACC GGCTTCATGG TCCCGGAGAA AAACCTGCCC 
TATGACCTGG GGCAATCCGG GGTCTGGGCG GATTGCGTGC GCCTGCGCCG TGCAGTGGTC 
CACAACGACT ACGCCGCCCT GGGACACAAG AAGGGGATGC CTTCCGGCCA TCCGCCGCTG 
GTCCGCATGA TGCTTTTGCC GGTCTTCCGC GTCGAAAGAA TCGTGGCCAT CGTGGCAATG 
GGCAACAAGG CGTCGGACTA CACCGACGAG GACGTGCAGG CCTTGACCGA GCTTGGCACC 
CTGCTGTGGG ATATTCTGGA ACACAAGCGC GCCCAGGAGG AACTGGGCAA GAGCGAAGCC 
CTCCTCAACA TGACCCAGCG CCTGAGCCGC ATTGGCGGCT GGCAGTGGGA TGTGACGCAG 
GGCGTCATGA CCTGGACCCG GGAGCTTTAT CGCCTGCACG GCTTTGCACC CGACCAGTTC 
GAGCCGGGTT CGCCGGAGCA TATCAGAAGC AGCCAGGCCT GTTACGAGCC CGAGGACCGG 
GAACTCATCC GCCAAGCATT CGAGAACTGC GTGACTCATG GCCTTCCCTA TGACCTGGAG 
TTGACGTTCA CCCCGGTCGG CGGAGAGCGG ATACGGATCC GCACCAGCGG GGAGGCGATG 
TGGGAGAACG GGCGCGTGTC CAAGGTGCTC GGCACCTTTC AGGACATCAC GGAAAAGAGG 
GCTCTCGAAC AACGCTACGA AGCCCTGTTC CAGCACATGC TGGACGGGTT CGCCCTGCAC 
GAGATCATTT GCGACGCCTC AGGCCGGCCC GTTGATTACC GTTTTCTGGA GGTCAATCCG 
GCCTTCGAAC GGCACACCGG ACTTGCAGGC AAGGACATTA AGGGCAGGAC GGTGCGCGAA 
GTCCTGCCCC TGGTCGAACA GGTCTGGATC GACACTTACG GGAAGGTGGC CCTGACGGGA 
GAACCTGTAT TTTTCGAGGA ATATGCCTCG GCCCAGGACA AATTCTTCCA GGTCAGCGCG 
TTTCGCCCAA CACCCATGCG CTTCGCCTGC ATTTTCACGG ACATAACCGA CCGCAAACGC 
TACGAGCGGG ACCTTCGTCA GGCCAAGGAC GCCGCCGAGG CCGCCAATGT GGCCAAGTCG 
GAATTTCTGG CCAACATGAG TCACGAAATC CGCACCCCTT TAAACGGGAT CATGGGCATC 
CTGCATTTGT TCGAGTCCCA GGACCTTCCT GGCGAACAGA AAAAACTTCT CGAATTGGCC 
AACACCTCGG CCGGACGGCT GAACGGCTTG CTCTCGGACA TCCTTGATCT GGCCAGGATC 
GAATCCGGTA AACTGGCCAT CCAGTCCGCG CCCTTCGCCC CCCGCGAATT GCGGGCTTCG 
ACCCTGGGAC TTTTCACCCT GGCCGCCCAG GGTAAAAACC TGAGCCTCGA ATTCATCCTC 
GACGACACCC TGCCGTCCAT GCTGGAGGGA GACGAATCCC GGCTGCGCCA AGTGCTCTTC 
AACCTGGTGG GCAACTCTCT TAAATTCACC CGCGCCGGTT TCGTGAGGGT AGAGGTCGGC 
CCGTTGCCGG GCGGGGCATC GCCCAGGATT CTCTTTTGCG TCACCGATTC CGGGCCCGGA 
ATTTCCGATC ACCAACTTAA AGATATTTTC ACCCCGTTTG TGCAGGGCGA GGATTCCTAT 
GTCCGCCGGC ATCAGGGCGC GGGTTTGGGG CTCGCCATCG TCAAACGCAT CGTTGGGCTG 
ATGGACGGAT GCCTGTGCGT TGACAGCTCC GCAAACGGGA CCACGATCTG TTTCTCCCTG 
CCTATGTCCG CTTCCACCGC CGCACAGACC GCCAGTCATG ACCCGGCCCC CATCAAGGGC 
AAAGCAGACA GCGATTTGGC AGGGCTGCGC ATTCTCCTTG TCGAAGACGA TTCCGTGAGC 
ATGTTCGCGG CCCGTCGTGT CCTGGAAAAG GCCGGACACA CCGTCAGCAT GGCCACGGAC 
GGCAGCGAGG TGCTGCCGCT GTTGCGGGCA CATGATTTCG ATGTGATCCT CATGGACGTG 
CAGTTGCCGG TCATGGACGG GCTACAGGCC ACTGCCGGAA TCCGCTCCGA AACGTCCCTG 
GGGGACAAAT CCCGCATCCC CATTGTGGCC ATGACGGCAT ACGCCATGAG TGGAGACCGG 
GAGAAGTTCC TGGCCGCCGG AATGGATGAC TACATCGCCA AACCCGTCAG CGCACCCGAA 
TTGCTGGACG TGCTGCGCAG GACGGGAATC CGTTTTCCGG AGAAATCATG A 

 

Protein sequence

MPTRENDLKT NPEQGQASED LLRELESLRR RVTELEDITC AAALAEETLA HQDALMQAML 
RNLPLDFWAR DLNENIIIQS DASVRLWGDL STTRVDDADV SEEIRSTWRS VNERVYAGEV 
LTGEKEYVLP NGEKRIFRDI VAPIRKGDET LGILGTNIDI TEHVHSILAL HKSEAHLASL 
LNSIDESAAL LEPDGKVITV NKTFAARVGR TVEECLGQSI YDFIPPEAAQ TRKRMVEDLV 
RNARPVAFED ERHGRWMRHS LSPVLGSDGT VAAVAIFAMD LTERRRREAL LLARQRLGEY 
AINHSLKDLL RKALDEAETV TGSTLSFLHF LDEKQRTMTM QAWSTRTLRT GFMVPEKNLP 
YDLGQSGVWA DCVRLRRAVV HNDYAALGHK KGMPSGHPPL VRMMLLPVFR VERIVAIVAM 
GNKASDYTDE DVQALTELGT LLWDILEHKR AQEELGKSEA LLNMTQRLSR IGGWQWDVTQ 
GVMTWTRELY RLHGFAPDQF EPGSPEHIRS SQACYEPEDR ELIRQAFENC VTHGLPYDLE 
LTFTPVGGER IRIRTSGEAM WENGRVSKVL GTFQDITEKR ALEQRYEALF QHMLDGFALH 
EIICDASGRP VDYRFLEVNP AFERHTGLAG KDIKGRTVRE VLPLVEQVWI DTYGKVALTG 
EPVFFEEYAS AQDKFFQVSA FRPTPMRFAC IFTDITDRKR YERDLRQAKD AAEAANVAKS 
EFLANMSHEI RTPLNGIMGI LHLFESQDLP GEQKKLLELA NTSAGRLNGL LSDILDLARI 
ESGKLAIQSA PFAPRELRAS TLGLFTLAAQ GKNLSLEFIL DDTLPSMLEG DESRLRQVLF 
NLVGNSLKFT RAGFVRVEVG PLPGGASPRI LFCVTDSGPG ISDHQLKDIF TPFVQGEDSY 
VRRHQGAGLG LAIVKRIVGL MDGCLCVDSS ANGTTICFSL PMSASTAAQT ASHDPAPIKG 
KADSDLAGLR ILLVEDDSVS MFAARRVLEK AGHTVSMATD GSEVLPLLRA HDFDVILMDV 
QLPVMDGLQA TAGIRSETSL GDKSRIPIVA MTAYAMSGDR EKFLAAGMDD YIAKPVSAPE 
LLDVLRRTGI RFPEKS