Gene Dbac_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1365 
Symbol 
ID8377030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1536150 
End bp1537514 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content63% 
IMG OID645000591 
ProductPAS modulated sigma54 specific transcriptional regulator, Fis family 
Protein accessionYP_003157877 
Protein GI256829149 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA ATCTGAATCA ATATTGGAAG ACCGTGGTCA ACACCATTCA GGACGGGATC 
ATGATCGTCA CGCCCGATGG CCAGATCGTG TCCGTCAACG AAGGCCTGGT GGCGATGACA
GGCTACTCCC GCGAGGAACT CATCGGCGCG TCATGCGCGA TTCTCGGCTG TTCGGCCTGC
GAGCTGGCGC GGGGGATTCC GCAGTGCCAC TGGTGCGTCA TGTTCAAGCA AGGTTCCTTG
CGCAAGCAGC AGTGTGCCCT GGTGCGCAAG GACGGAACGC GCGTGCCCGT GGTCAAGAAC
GCTTCCGTGC TGAAAGACAA GGACGGCGAG ACCATCGGCG CGGTGGAGAC CATCACCGAC
ATCTCCGATC TGGTGGACAA GGAGGAGCAG CTGGAGATCT TCCGGCGCGA GATCTCGCGG
GAAGACTCCT TTCACGGGAT CGTGGGCCGC GCGGCCACCA TGCAGCAGGT TTTCGATCTC
ATCGACGGCG TGGCGCAGAT CGATGCTCCG GTCATCATCT ACGGCGAAAG CGGGACGGGC
AAGGAGCTGG TGGCCAAGGC CATCCACGAT GCCGGGCCGC GCCGGGACAA GCCTTTCATC
AAGGTCAACT GCGCGGCGCT GAACGAATCG CTGCTGGAGA GCGAACTCTT CGGGCATGTC
AAAGGCGCCT ACACAGGAGC GCACAAGGAT CGCATGGGCC GCTTCGAGAG CGCGGGCGAC
GGGGACATCT TTCTGGACGA AATCGGGGAC CTGCCCGCCA GTACCCAGGT CAAGCTCCTG
CGCGTGCTGG AGGAAAAGGT CATCGAGCGC GTGGGCGACC ATCGTCCCAT CCCGGTCCAG
GCCAGGATCA TCACCGCCAC CAACCGCGAC CTGACGGATC TGGTCGCCAG AAACCTCTTT
CGCCAGGACC TCTACTACCG CATCAATGTC ATCCCTATCC GCATGCCTGC GCTGCGCGAG
CGCCGCGAGG ACATCCCGCT CCTGGCCTCC ACCTTTTTCC TGCGCACGCA GCTCAAATCC
GGCAAGAAAG TGCACGGCAT CTCGCCCGCG GCCATGGAGC TGCTCGTGCG CCACTCCTGG
CCCGGCAACG TGCGCGAGCT GCGCAGCGCC TTCGAGTACG CCTTCGTGGC CTGCAAGACG
GACATGATCG AACCCCGCGA CCTGCCGGCC GAACTCATGA ACGGAGCGGT CGTGTGCACC
CCTGCCGATG TCGCGGCCAG AAGCCTGGAC GAAATCAAAA AGGAACGCCT CGCCCAAGCC
CTGCGCGAGG CAAACGGAAA CCAGTCCGAA GCGGCCCGAA TCCTCGGTAT TTCCCGGACC
AGCGTGTGGA GCCAGATGCG GCGCTACGGG ATGGGCAAAG GGTGA
 
Protein sequence
MEENLNQYWK TVVNTIQDGI MIVTPDGQIV SVNEGLVAMT GYSREELIGA SCAILGCSAC 
ELARGIPQCH WCVMFKQGSL RKQQCALVRK DGTRVPVVKN ASVLKDKDGE TIGAVETITD
ISDLVDKEEQ LEIFRREISR EDSFHGIVGR AATMQQVFDL IDGVAQIDAP VIIYGESGTG
KELVAKAIHD AGPRRDKPFI KVNCAALNES LLESELFGHV KGAYTGAHKD RMGRFESAGD
GDIFLDEIGD LPASTQVKLL RVLEEKVIER VGDHRPIPVQ ARIITATNRD LTDLVARNLF
RQDLYYRINV IPIRMPALRE RREDIPLLAS TFFLRTQLKS GKKVHGISPA AMELLVRHSW
PGNVRELRSA FEYAFVACKT DMIEPRDLPA ELMNGAVVCT PADVAARSLD EIKKERLAQA
LREANGNQSE AARILGISRT SVWSQMRRYG MGKG