Gene Dbac_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_1236 
Symbol 
ID8376901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp1365757 
End bp1366569 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content55% 
IMG OID645000469 
ProductIntegrase catalytic region 
Protein accessionYP_003157755 
Protein GI256829027 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAGCG AGCATGGCAT CAGTGAGCGG CAGGCATGCG CTGCGCTGGG CCTTAGCCGG 
ACTGTGTACC GGTATGAGCC CAAACCGAAA GATGATTCGC CGATCATTGA AGCGCTTCTG
GGACTGGTCG ACCGGTATCC TCGTTACGGT TTCGGCAAGC TGTTCGCGGT ATTGCGCAGA
CACGGTTTTC GCTGGAACCA TAAACGCGTC TACCGGGTAT ATTGTCTTTT GAAGATGAAT
CTCCGGCGCA AAGGCAAGAA GCGCCTGCCC TCGCGAAACC CGCAACCACT GGCGGTTCCG
CCATGCGCGA ATGTCTGCTG GTCCATTGAC TTCATGCATG ACGCGCTGGC CAGCGGTCAG
AGGTTTAGGA CTTTCAACGT GCTGGACGAC TTCAGTCGTG AGTGTTTGGG GATTGAGGTG
GATACGAATC TGCCAGCGGC AAGGATATTG CGGGTTTTGG ATCGGATTGT GGCTTGGCGC
GGGCTTCCTG CCAAGCTGAG AATGGACAAC GGGCCGGAGC TGATTTCCGT GCTGCTGGCC
GACTGGGCCG AAAAGAACGG CGTGGCATTG GAGTTCATCC AGCCAGGCAA GCCCACGCAG
AATTCGTACA TTGAGCGGTT CAACAAGACC TACAGGGAAG AGGTCCTAGA CTTCTACTTT
TTCAAATCAC TCACGGAAGT GAAGGAAATT ACGGAGAATT GGCAGAGGCA GTACAACGAG
GAGCGGCCCC ATGAGTCTCT TGGCGATTTG ACCCCGGCAG AGTTCCTCAT GAAATATTCA
CCCAAGGAAG TCTCTACTTT TGGATGGCAC TAA
 
Protein sequence
MHSEHGISER QACAALGLSR TVYRYEPKPK DDSPIIEALL GLVDRYPRYG FGKLFAVLRR 
HGFRWNHKRV YRVYCLLKMN LRRKGKKRLP SRNPQPLAVP PCANVCWSID FMHDALASGQ
RFRTFNVLDD FSRECLGIEV DTNLPAARIL RVLDRIVAWR GLPAKLRMDN GPELISVLLA
DWAEKNGVAL EFIQPGKPTQ NSYIERFNKT YREEVLDFYF FKSLTEVKEI TENWQRQYNE
ERPHESLGDL TPAEFLMKYS PKEVSTFGWH